RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 NSFL1CQ9UNZ2 370 aaKnown RBP7.83□□□□□ -1.16
PTCD3-215ENST00000484203 GJA3Q9Y6H8 435 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 SNED1Q8TER0 1413 aa7.83□□□□□ -1.16
PTCD3-215ENST00000484203 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 H7C1D1 291 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 TNFRSF10AO00220 468 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 LCE2BO14633 110 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 VAMP4O75379 141 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 MMP14P50281 582 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 PRR20EP86478 221 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 PRR20CP86479 221 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 PRR20DP86480 221 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 PRR20BP86481 221 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 PRR20AP86496 221 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 FKBP5Q13451 457 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-215ENST00000484203 FAM9BQ8IZU0 186 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 EHBP1Q8NDI1 1231 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 DNAAF4Q8WXU2 420 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 DPF2Q92785 391 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 GPKOWQ92917 476 aaPredicted RBP eCLIP7.82□□□□□ -1.163e-6■□□□□ 10.4
PTCD3-215ENST00000484203 FOXJ1Q92949 421 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 PRM3Q9NNZ6 103 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 ANKIB1Q9P2G1 1089 aa7.82□□□□□ -1.16
PTCD3-215ENST00000484203 VIRMAQ69YN4 1812 aaKnown RBP7.81□□□□□ -1.16
PTCD3-215ENST00000484203 TMEM88BA6NKF7 163 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 NEURL1BA8MQ27 555 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 E9PSI1 815 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 H7C1W4 665 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 WNT7AO00755 349 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 ATP2B4P23634 1241 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 IGHMBP2P38935 993 aaKnown RBP7.81□□□□□ -1.16
PTCD3-215ENST00000484203 CTSWP56202 376 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 CXCL9Q07325 125 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 TRIM67Q6ZTA4 783 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 CNTROBQ8N137 903 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 CELF1Q92879 486 aaKnown RBP7.81□□□□□ -1.16
PTCD3-215ENST00000484203 PLA2G12BQ9BX93 195 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 BCL2L13Q9BXK5 485 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 BSDC1Q9NW68 430 aaPredicted RBP7.81□□□□□ -1.16
PTCD3-215ENST00000484203 GPRC5DQ9NZD1 345 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 PKD2L1Q9P0L9 805 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 GGA1Q9UJY5 639 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 NDUFB9Q9Y6M9 179 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 RTL9Q8NET4 1388 aa7.81□□□□□ -1.16
PTCD3-215ENST00000484203 XDHP47989 1333 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 PASKQ96RG2 1323 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 TNRC6CQ9HCJ0 1690 aaKnown RBP7.8□□□□□ -1.16
PTCD3-215ENST00000484203 CCER2I3L3R5 266 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 GDF9O60383 454 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 IGKV5-2P06315 115 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 SCNN1DP51172 638 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 EXOSC9Q06265 439 aaKnown RBP7.8□□□□□ -1.16
PTCD3-215ENST00000484203 GCKRQ14397 625 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 PKDCCQ504Y2 493 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 PDXDC2PQ6P474 469 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 PODNQ7Z5L7 613 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 BPHLQ86WA6 291 aaPredicted RBP7.8□□□□□ -1.16
PTCD3-215ENST00000484203 TTLL11Q8NHH1 800 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 MRGPRX2Q96LB1 330 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 ANKRD2Q9GZV1 360 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 ANKRD31Q8N7Z5 1873 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 WDR90Q96KV7 1748 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 SLX4Q8IY92 1834 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 DLG5Q8TDM6 1919 aa7.8□□□□□ -1.16
PTCD3-215ENST00000484203 MAGEB6P1A0A0J9YX57 407 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 ALDH1L1O75891 902 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 DGAT1O75907 488 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 UFL1O94874 794 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 CT47B1P0C2W7 299 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-215ENST00000484203 EPS15P42566 896 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 GMPSP49915 693 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-215ENST00000484203 GPSM2P81274 684 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 UBE3BQ7Z3V4 1068 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 MPHOSPH8Q99549 860 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 POLLQ9UGP5 575 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 LEMD3Q9Y2U8 911 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 GTF3C3Q9Y5Q9 886 aa7.79□□□□□ -1.16
PTCD3-215ENST00000484203 COL11A2P13942 1736 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-215ENST00000484203 RAD17O75943 681 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 CSF1RP07333 972 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 VARSP26640 1264 aaKnown RBP7.78□□□□□ -1.16
PTCD3-215ENST00000484203 ECE1P42892 770 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 PTK2Q05397 1052 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
PTCD3-215ENST00000484203 CDC37L1Q7L3B6 337 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 SH3BP5LQ7L8J4 393 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 AGBL3Q8NEM8 1001 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 ARHGAP9Q9BRR9 750 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 SEC31BQ9NQW1 1179 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 PGAP2Q9UHJ9 254 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 CNOT7Q9UIV1 285 aaKnown RBP7.78□□□□□ -1.16
PTCD3-215ENST00000484203 HDAC5Q9UQL6 1122 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 PTPRCP08575 1304 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
PTCD3-215ENST00000484203 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 ANKRD18BA2A2Z9 1011 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 ECE2O60344 883 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 VIL1P09327 827 aaKnown RBP7.77□□□□□ -1.17
PTCD3-215ENST00000484203 IFIT5Q13325 482 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms