RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 RASGRF1Q13972 1273 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 ZKSCAN2Q63HK3 967 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 XAGE2Q96GT9 111 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 C1orf115Q9H7X2 142 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 USP40Q9NVE5 1235 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 CCL15-CCL14A0A0B4J2E2 113 aa23.78■■□□□ 1.4
NDUFA3-213ENST00000484103 UNCXA6NJT0 531 aa23.78■■□□□ 1.4
NDUFA3-213ENST00000484103 CCL15Q16663 113 aa23.78■■□□□ 1.4
NDUFA3-213ENST00000484103 FAM83AQ86UY5 434 aa23.78■■□□□ 1.4
NDUFA3-213ENST00000484103 DZIP1Q86YF9 867 aaKnown RBP23.78■■□□□ 1.4
NDUFA3-213ENST00000484103 MRIQ9BWK5 157 aa23.78■■□□□ 1.4
NDUFA3-213ENST00000484103 GORABQ5T7V8 394 aa23.77■■□□□ 1.4
NDUFA3-213ENST00000484103 OTUD7BQ6GQQ9 843 aa23.77■■□□□ 1.4
NDUFA3-213ENST00000484103 TRIM17Q9Y577 477 aa23.77■■□□□ 1.4
NDUFA3-213ENST00000484103 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
NDUFA3-213ENST00000484103 CD99L2Q8TCZ2 262 aa23.76■■□□□ 1.39
NDUFA3-213ENST00000484103 BRI3BPQ8WY22 251 aa23.76■■□□□ 1.39
NDUFA3-213ENST00000484103 AKAP2Q9Y2D5 859 aa23.76■■□□□ 1.39
NDUFA3-213ENST00000484103 SNCAIPQ9Y6H5 919 aa23.76■■□□□ 1.39
NDUFA3-213ENST00000484103 AK9Q5TCS8 1911 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 SEMA3EO15041 775 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 ECM2O94769 699 aaPredicted RBP23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 INPP5BP32019 993 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 G3BP1Q13283 466 aaKnown RBP eCLIP23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 MTX1Q13505 466 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 DCAF15Q66K64 600 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 PI16Q6UXB8 463 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 ZFPM1Q8IX07 1006 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 FAM151AQ8WW52 585 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 MS4A4AQ96JQ5 239 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 CFHR5Q9BXR6 569 aa23.75■■□□□ 1.39
NDUFA3-213ENST00000484103 RGS19P49795 217 aa23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 MVPQ14764 893 aaKnown RBP23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 PKN2Q16513 984 aaKnown RBP23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 FKBP1CQ5VVH2 108 aa23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 ITPRIPQ8IWB1 547 aa23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 ZNF341Q9BYN7 854 aa23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 FAM198AQ9UFP1 575 aa23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 SALL1Q9NSC2 1324 aa23.74■■□□□ 1.39
NDUFA3-213ENST00000484103 GTF2A2P52657 109 aa23.73■■□□□ 1.39
NDUFA3-213ENST00000484103 OS9Q13438 667 aaPredicted RBP23.73■■□□□ 1.39
NDUFA3-213ENST00000484103 PICALMQ13492 652 aa23.73■■□□□ 1.39
NDUFA3-213ENST00000484103 TAF1CQ15572 869 aaPredicted RBP23.73■■□□□ 1.39
NDUFA3-213ENST00000484103 FBXO46Q6PJ61 603 aaPredicted RBP23.73■■□□□ 1.39
NDUFA3-213ENST00000484103 HOOK2Q96ED9 719 aa23.73■■□□□ 1.39
NDUFA3-213ENST00000484103 SPDYE5A6NIY4 337 aa23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 NOM1Q5C9Z4 860 aaKnown RBP23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 TBC1D9Q6ZT07 1266 aa23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 ZSCAN29Q8IWY8 852 aaPredicted RBP23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 FAM43AQ8N2R8 423 aa23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 ZGPATQ8N5A5 531 aaKnown RBP23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 LAMB1P07942 1786 aa23.72■■□□□ 1.39
NDUFA3-213ENST00000484103 MYH2Q9UKX2 1941 aa23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 RPAP1Q9BWH6 1393 aaPredicted RBP23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 TESPA1A2RU30 521 aaPredicted RBP23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 IRF6O14896 467 aa23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 BTDP43251 543 aa23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 RGS3P49796 1198 aa23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 OTOP1Q7RTM1 612 aa23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 ERO1BQ86YB8 467 aa23.71■■□□□ 1.39
NDUFA3-213ENST00000484103 SLURP2P0DP57 97 aa23.7■■□□□ 1.38
NDUFA3-213ENST00000484103 RLBP1P12271 317 aa23.7■■□□□ 1.38
NDUFA3-213ENST00000484103 HMG20BQ9P0W2 317 aa23.7■■□□□ 1.38
NDUFA3-213ENST00000484103 SP3Q02447 781 aa23.69■■□□□ 1.38
NDUFA3-213ENST00000484103 MECOMQ03112 1051 aa23.69■■□□□ 1.38
NDUFA3-213ENST00000484103 ERICH6Q7L0X2 663 aa23.69■■□□□ 1.38
NDUFA3-213ENST00000484103 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.69■■□□□ 1.38
NDUFA3-213ENST00000484103 ERO1AQ96HE7 468 aa23.69■■□□□ 1.38
NDUFA3-213ENST00000484103 CAP1Q01518 475 aa23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 SNAPC2Q13487 334 aa23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 SPTY2D1Q68D10 685 aaPredicted RBP23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 SPATA5Q8NB90 893 aa23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 ZFYVE28Q9HCC9 887 aa23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 RAI14Q9P0K7 980 aa23.68■■□□□ 1.38
NDUFA3-213ENST00000484103 BTBD19C9JJ37 291 aa23.67■■□□□ 1.38
NDUFA3-213ENST00000484103 CETPP11597 493 aa23.67■■□□□ 1.38
NDUFA3-213ENST00000484103 MROH7-TTC4A0A0A0MT08 1334 aa23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 GAKO14976 1311 aa23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 SURF6O75683 361 aaKnown RBP23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 PPIL2Q13356 520 aa23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 SLF2Q8IX21 1173 aa23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 EFCC1Q9HA90 598 aa23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 DDX4Q9NQI0 724 aaKnown RBP23.66■■□□□ 1.38
NDUFA3-213ENST00000484103 MCAMP43121 646 aa23.65■■□□□ 1.38
NDUFA3-213ENST00000484103 TTC39AQ5SRH9 613 aa23.65■■□□□ 1.38
NDUFA3-213ENST00000484103 SH3BP5LQ7L8J4 393 aa23.65■■□□□ 1.38
NDUFA3-213ENST00000484103 PANK1Q8TE04 598 aa23.65■■□□□ 1.38
NDUFA3-213ENST00000484103 PDS5AQ29RF7 1337 aaKnown RBP23.64■■□□□ 1.38
NDUFA3-213ENST00000484103 DDTLA6NHG4 134 aaPredicted RBP23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 WDHD1O75717 1129 aaPredicted RBP23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 ATP8B2P98198 1209 aa23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 POLA2Q14181 598 aa23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 ZNF384Q8TF68 577 aa23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 DBNDD2Q9BQY9 259 aa23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 BCL11AQ9H165 835 aa23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 LRP2BPQ9P2M1 347 aa23.64■■□□□ 1.37
NDUFA3-213ENST00000484103 DOCK2Q92608 1830 aa23.63■■□□□ 1.37
NDUFA3-213ENST00000484103 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
NDUFA3-213ENST00000484103 FAM196BA6NMK8 535 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms