RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 COL13A1Q5TAT6 717 aaPredicted RBP9.09□□□□□ -0.95
RIF1-210ENST00000484077 IGF2-ASQ6U949 168 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 GJD3Q8N144 294 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 THEMISQ8N1K5 641 aaPredicted RBP9.09□□□□□ -0.95
RIF1-210ENST00000484077 CEP120Q8N960 986 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
RIF1-210ENST00000484077 SNX29Q8TEQ0 813 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 FBXO41Q8TF61 875 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 PBX4Q9BYU1 374 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 SALL4Q9UJQ4 1053 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 CPS1P31327 1500 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 TMEM2Q9UHN6 1383 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 PPLO60437 1756 aa9.09□□□□□ -0.95
RIF1-210ENST00000484077 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
RIF1-210ENST00000484077 ZNF211Q13398 564 aaPredicted RBP9.08□□□□□ -0.96
RIF1-210ENST00000484077 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
RIF1-210ENST00000484077 IL22RA1Q8N6P7 574 aa9.08□□□□□ -0.96
RIF1-210ENST00000484077 CNTN3Q9P232 1028 aa9.08□□□□□ -0.96
RIF1-210ENST00000484077 NEXMIFQ5QGS0 1516 aa9.08□□□□□ -0.96
RIF1-210ENST00000484077 RAB3GAP2Q9H2M9 1393 aa9.08□□□□□ -0.96
RIF1-210ENST00000484077 NRXN3Q9Y4C0 1643 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
RIF1-210ENST00000484077 IDI1Q13907 227 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 GDF6Q6KF10 455 aaPredicted RBP9.07□□□□□ -0.96
RIF1-210ENST00000484077 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 C1orf127Q8N9H9 656 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 CITED4Q96RK1 184 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 SLC52A1Q9NWF4 448 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 TRIM33Q9UPN9 1127 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 PPME1Q9Y570 386 aa9.07□□□□□ -0.96
RIF1-210ENST00000484077 RIMS2Q9UQ26 1411 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 XIRP1Q702N8 1843 aaKnown RBP9.06□□□□□ -0.96
RIF1-210ENST00000484077 H3BRB1 525 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 ADAM23O75077 832 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 TNFRSF21O75509 655 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 SERPINB4P48594 390 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 TXNRD3Q86VQ6 643 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
RIF1-210ENST00000484077 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
RIF1-210ENST00000484077 SETD1AO15047 1707 aaKnown RBP9.05□□□□□ -0.96
RIF1-210ENST00000484077 SETBP1Q9Y6X0 1596 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 FAM177BA6PVY3 158 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
RIF1-210ENST00000484077 DLL1O00548 723 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 PHACTR2O75167 634 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 BRD1O95696 1058 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 NEFLP07196 543 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 PTPRAP18433 802 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 LTKP29376 864 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 CDC27P30260 824 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 ATP11AP98196 1134 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 SUZ12Q15022 739 aaKnown RBP9.05□□□□□ -0.96
RIF1-210ENST00000484077 ADAM19Q9H013 955 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 CHRDQ9H2X0 955 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 ANO2Q9NQ90 1003 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 BRPF3Q9ULD4 1205 aa9.05□□□□□ -0.96
RIF1-210ENST00000484077 CHD2O14647 1828 aaKnown RBP9.04□□□□□ -0.96
RIF1-210ENST00000484077 NDUFB5O43674 189 aa9.04□□□□□ -0.96
RIF1-210ENST00000484077 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
RIF1-210ENST00000484077 EDN3P14138 238 aa9.04□□□□□ -0.96
RIF1-210ENST00000484077 CCDC87Q9NVE4 849 aa9.04□□□□□ -0.96
RIF1-210ENST00000484077 USP21Q9UK80 565 aa9.04□□□□□ -0.96
RIF1-210ENST00000484077 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
RIF1-210ENST00000484077 NKTRP30414 1462 aaKnown RBP9.03□□□□□ -0.96
RIF1-210ENST00000484077 XRN1Q8IZH2 1706 aaKnown RBP9.03□□□□□ -0.96
RIF1-210ENST00000484077 PLEKHG1Q9ULL1 1385 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 A6NHS1 94 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 PDE3BQ13370 1112 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 ECM1Q16610 540 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 FAM117BQ6P1L5 589 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 SHISA2Q6UWI4 295 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
RIF1-210ENST00000484077 DZANK1Q9NVP4 752 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 KANSL3Q9P2N6 904 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 EID1Q9Y6B2 187 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
RIF1-210ENST00000484077 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
RIF1-210ENST00000484077 SETDB1Q15047 1291 aa9.02□□□□□ -0.97
RIF1-210ENST00000484077 TMEM130Q8N3G9 435 aa9.02□□□□□ -0.97
RIF1-210ENST00000484077 TMEM102Q8N9M5 508 aaPredicted RBP9.02□□□□□ -0.97
RIF1-210ENST00000484077 WNT8BQ93098 351 aa9.02□□□□□ -0.97
RIF1-210ENST00000484077 AMOTL2Q9Y2J4 779 aa9.02□□□□□ -0.97
RIF1-210ENST00000484077 NFKBIEO00221 500 aa9.01□□□□□ -0.97
RIF1-210ENST00000484077 DOC2BQ14184 412 aa9.01□□□□□ -0.97
RIF1-210ENST00000484077 KLHL23Q8NBE8 558 aa9.01□□□□□ -0.97
RIF1-210ENST00000484077 LAMC1P11047 1609 aa9.01□□□□□ -0.97
RIF1-210ENST00000484077 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
RIF1-210ENST00000484077 PDE2AO00408 941 aaPredicted RBP9□□□□□ -0.97
RIF1-210ENST00000484077 FURINP09958 794 aa9□□□□□ -0.97
RIF1-210ENST00000484077 CABP4P57796 275 aa9□□□□□ -0.97
RIF1-210ENST00000484077 POP1Q99575 1024 aaKnown RBP9□□□□□ -0.97
RIF1-210ENST00000484077 ZFYVE28Q9HCC9 887 aa9□□□□□ -0.97
RIF1-210ENST00000484077 TPSG1Q9NRR2 321 aa9□□□□□ -0.97
RIF1-210ENST00000484077 ADAMTS13Q76LX8 1427 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 EREGO14944 169 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 H2AFB2P0C5Z0 115 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 WFDC12Q8WWY7 111 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms