RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 KDF1Q8NAX2 398 aaPredicted RBP11.37□□□□□ -0.59
COL8A1-207ENST00000483969 ZNF428Q96B54 188 aa11.37□□□□□ -0.59
COL8A1-207ENST00000483969 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
COL8A1-207ENST00000483969 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
COL8A1-207ENST00000483969 MYH14Q7Z406 1995 aaKnown RBP11.37□□□□□ -0.59
COL8A1-207ENST00000483969 C10orf71Q711Q0 1435 aa11.36□□□□□ -0.59
COL8A1-207ENST00000483969 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
COL8A1-207ENST00000483969 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
COL8A1-207ENST00000483969 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
COL8A1-207ENST00000483969 KSR2Q6VAB6 950 aa11.36□□□□□ -0.59
COL8A1-207ENST00000483969 ZNF592Q92610 1267 aa11.36□□□□□ -0.59
COL8A1-207ENST00000483969 TUBGCP6Q96RT7 1819 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 CT47B1P0C2W7 299 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-207ENST00000483969 KCNA3P22001 575 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 CHRNA5P30532 468 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
COL8A1-207ENST00000483969 ZNF385CQ66K41 422 aaPredicted RBP11.35□□□□□ -0.59
COL8A1-207ENST00000483969 NLRP10Q86W26 655 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 ISCA1Q9BUE6 129 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
COL8A1-207ENST00000483969 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
COL8A1-207ENST00000483969 PI4KAP2A4QPH2 592 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 FLIIQ13045 1269 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 G2E3Q7L622 706 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 PI4KAP1Q8N8J0 262 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL8A1-207ENST00000483969 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 MYD88Q99836 296 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
COL8A1-207ENST00000483969 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
COL8A1-207ENST00000483969 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
COL8A1-207ENST00000483969 COL24A1Q17RW2 1714 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-207ENST00000483969 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 NTSR2O95665 410 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 FBXO45P0C2W1 286 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
COL8A1-207ENST00000483969 ALDH1B1P30837 517 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 GSK3AP49840 483 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 RNF144AP50876 292 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-207ENST00000483969 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
COL8A1-207ENST00000483969 STYK1Q6J9G0 422 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 CNKSR1Q969H4 720 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 MASTLQ96GX5 879 aa11.33□□□□□ -0.6
COL8A1-207ENST00000483969 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
COL8A1-207ENST00000483969 SRGNP10124 158 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 NPR1P16066 1061 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL8A1-207ENST00000483969 GPC1P35052 558 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
COL8A1-207ENST00000483969 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-207ENST00000483969 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
COL8A1-207ENST00000483969 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
COL8A1-207ENST00000483969 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
COL8A1-207ENST00000483969 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-207ENST00000483969 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
COL8A1-207ENST00000483969 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
COL8A1-207ENST00000483969 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
COL8A1-207ENST00000483969 FAM89AQ96GI7 184 aa11.3□□□□□ -0.6
COL8A1-207ENST00000483969 RBM17Q96I25 401 aaKnown RBP11.3□□□□□ -0.6
COL8A1-207ENST00000483969 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
COL8A1-207ENST00000483969 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
COL8A1-207ENST00000483969 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
COL8A1-207ENST00000483969 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-207ENST00000483969 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-207ENST00000483969 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-207ENST00000483969 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
COL8A1-207ENST00000483969 CRY2Q49AN0 593 aa11.29□□□□□ -0.6
COL8A1-207ENST00000483969 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
COL8A1-207ENST00000483969 SSH1Q8WYL5 1049 aa11.29□□□□□ -0.6
COL8A1-207ENST00000483969 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
COL8A1-207ENST00000483969 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-207ENST00000483969 IGKV5-2P06315 115 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 RASSF7Q02833 373 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 SRSF11Q05519 484 aaKnown RBP11.28□□□□□ -0.6
COL8A1-207ENST00000483969 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 CRAMP1Q96RY5 1269 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-207ENST00000483969 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 PTPRCP08575 1304 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 ADCY9O60503 1353 aa11.28□□□□□ -0.6
COL8A1-207ENST00000483969 SCN7AQ01118 1682 aa11.27□□□□□ -0.6
COL8A1-207ENST00000483969 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.61
COL8A1-207ENST00000483969 GDF11O95390 407 aa11.27□□□□□ -0.61
COL8A1-207ENST00000483969 NR1H3Q13133 447 aa11.27□□□□□ -0.61
COL8A1-207ENST00000483969 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
COL8A1-207ENST00000483969 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms