RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
UBR4-213ENST00000483922 OSBPP22059 807 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 PSMC4P43686 418 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 PPATQ06203 517 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 METTL24Q5JXM2 366 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 FKBP1CQ5VVH2 108 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 PRO3102Q9H379 93 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 SRRDQ9UH36 339 aa16.27■□□□□ 0.2
UBR4-213ENST00000483922 LAMA3Q16787 3333 aa16.27■□□□□ 0.19
UBR4-213ENST00000483922 PDHXO00330 501 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 GNRH1P01148 92 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 NFIAQ12857 509 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 KCNH4Q9UQ05 1017 aa16.26■□□□□ 0.19
UBR4-213ENST00000483922 SLURP2P0DP57 97 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 RFX5P48382 616 aaPredicted RBP16.25■□□□□ 0.19
UBR4-213ENST00000483922 PRMT2P55345 433 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 KIF22Q14807 665 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 CAVIN4Q5BKX8 364 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 FAM151AQ8WW52 585 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 COL6A3P12111 3177 aa16.25■□□□□ 0.19
UBR4-213ENST00000483922 FRAT2O75474 233 aaPredicted RBP16.24■□□□□ 0.19
UBR4-213ENST00000483922 BCRP11274 1271 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 CCL5P13501 91 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 GRK4P32298 578 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 GJA8P48165 433 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 TCP10Q12799 353 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 CDC42EP5Q6NZY7 148 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 GABRQQ9UN88 632 aa16.24■□□□□ 0.19
UBR4-213ENST00000483922 CYP2C8P10632 490 aa16.23■□□□□ 0.19
UBR4-213ENST00000483922 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
UBR4-213ENST00000483922 DPF3Q92784 378 aa16.23■□□□□ 0.19
UBR4-213ENST00000483922 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
UBR4-213ENST00000483922 SUGT1Q9Y2Z0 365 aa16.23■□□□□ 0.19
UBR4-213ENST00000483922 DAGLAQ9Y4D2 1042 aa16.23■□□□□ 0.19
UBR4-213ENST00000483922 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
UBR4-213ENST00000483922 PHF20L1A8MW92 1017 aa16.22■□□□□ 0.19
UBR4-213ENST00000483922 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
UBR4-213ENST00000483922 GJB1P08034 283 aa16.22■□□□□ 0.19
UBR4-213ENST00000483922 PRKCZQ05513 592 aa16.22■□□□□ 0.19
UBR4-213ENST00000483922 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
UBR4-213ENST00000483922 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
UBR4-213ENST00000483922 ATRNL1Q5VV63 1379 aa16.22■□□□□ 0.19
UBR4-213ENST00000483922 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
UBR4-213ENST00000483922 A0A0C4DFX4 3053 aa16.21■□□□□ 0.19
UBR4-213ENST00000483922 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.19
UBR4-213ENST00000483922 PRDX5P30044 214 aa16.21■□□□□ 0.19
UBR4-213ENST00000483922 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
UBR4-213ENST00000483922 SH3BP5LQ7L8J4 393 aa16.21■□□□□ 0.19
UBR4-213ENST00000483922 TMOD2Q9NZR1 351 aa16.21■□□□□ 0.19
UBR4-213ENST00000483922 KIF16BQ96L93 1317 aa16.2■□□□□ 0.18
UBR4-213ENST00000483922 PUM3Q15397 648 aaKnown RBP16.2■□□□□ 0.18
UBR4-213ENST00000483922 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
UBR4-213ENST00000483922 HOOK2Q96ED9 719 aa16.2■□□□□ 0.18
UBR4-213ENST00000483922 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
UBR4-213ENST00000483922 UNC93B1Q9H1C4 597 aa16.2■□□□□ 0.18
UBR4-213ENST00000483922 EYA2O00167 538 aa16.19■□□□□ 0.18
UBR4-213ENST00000483922 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
UBR4-213ENST00000483922 USP40Q9NVE5 1235 aa16.19■□□□□ 0.18
UBR4-213ENST00000483922 MAST3O60307 1309 aa16.19■□□□□ 0.18
UBR4-213ENST00000483922 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
UBR4-213ENST00000483922 SOX1O00570 391 aaPredicted RBP16.18■□□□□ 0.18
UBR4-213ENST00000483922 CXCL11O14625 94 aa16.18■□□□□ 0.18
UBR4-213ENST00000483922 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
UBR4-213ENST00000483922 IFIT1P09914 478 aaKnown RBP16.18■□□□□ 0.18
UBR4-213ENST00000483922 HOXD10P28358 340 aa16.18■□□□□ 0.18
UBR4-213ENST00000483922 WDR66Q8TBY9 1149 aa16.18■□□□□ 0.18
UBR4-213ENST00000483922 LPIN2Q92539 896 aa16.18■□□□□ 0.18
UBR4-213ENST00000483922 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
UBR4-213ENST00000483922 SGPL1O95470 568 aa16.17■□□□□ 0.18
UBR4-213ENST00000483922 ELNP15502 786 aa16.17■□□□□ 0.18
UBR4-213ENST00000483922 MAP3K10Q02779 954 aa16.17■□□□□ 0.18
UBR4-213ENST00000483922 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
UBR4-213ENST00000483922 AFG3L2Q9Y4W6 797 aa16.17■□□□□ 0.18
UBR4-213ENST00000483922 ZHX2Q9Y6X8 837 aa16.17■□□□□ 0.18
UBR4-213ENST00000483922 A0A0G2JLL6 359 aaPredicted RBP16.16■□□□□ 0.18
UBR4-213ENST00000483922 PTPRAP18433 802 aa16.16■□□□□ 0.18
UBR4-213ENST00000483922 FLT3LGP49771 235 aa16.16■□□□□ 0.18
UBR4-213ENST00000483922 PRRT2Q7Z6L0 340 aaPredicted RBP16.16■□□□□ 0.18
UBR4-213ENST00000483922 CCDC84Q86UT8 332 aaPredicted RBP16.16■□□□□ 0.18
UBR4-213ENST00000483922 DDTLA6NHG4 134 aaPredicted RBP16.15■□□□□ 0.18
UBR4-213ENST00000483922 MGAMO43451 1857 aa16.15■□□□□ 0.18
UBR4-213ENST00000483922 ADCY3O60266 1144 aa16.15■□□□□ 0.18
UBR4-213ENST00000483922 FCGRTP55899 365 aa16.15■□□□□ 0.18
UBR4-213ENST00000483922 SSH1Q8WYL5 1049 aa16.15■□□□□ 0.18
UBR4-213ENST00000483922 DDX4Q9NQI0 724 aaKnown RBP16.15■□□□□ 0.18
UBR4-213ENST00000483922 BIN2Q9UBW5 565 aaPredicted RBP16.15■□□□□ 0.18
UBR4-213ENST00000483922 RFX7Q2KHR2 1363 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 SLC5A1P13866 664 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 PHKA1P46020 1223 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 RGS3P49796 1198 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms