RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 LCE4AQ5TA78 99 aa8.44□□□□□ -1.06
COMMD3-213ENST00000483684 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
COMMD3-213ENST00000483684 DDX54Q8TDD1 881 aaKnown RBP8.44□□□□□ -1.06
COMMD3-213ENST00000483684 TIMELESSQ9UNS1 1208 aa8.44□□□□□ -1.06
COMMD3-213ENST00000483684 DAGLAQ9Y4D2 1042 aa8.44□□□□□ -1.06
COMMD3-213ENST00000483684 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
COMMD3-213ENST00000483684 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
COMMD3-213ENST00000483684 ANO2Q9NQ90 1003 aa8.43□□□□□ -1.06
COMMD3-213ENST00000483684 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
COMMD3-213ENST00000483684 PTPN12Q05209 780 aaKnown RBP8.42□□□□□ -1.06
COMMD3-213ENST00000483684 ZNF211Q13398 564 aaPredicted RBP8.42□□□□□ -1.06
COMMD3-213ENST00000483684 PLCL1Q15111 1095 aa8.42□□□□□ -1.06
COMMD3-213ENST00000483684 CYP27C1Q4G0S4 372 aa8.42□□□□□ -1.06
COMMD3-213ENST00000483684 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
COMMD3-213ENST00000483684 KRTAP4-11Q9BYQ6 195 aa8.42□□□□□ -1.06
COMMD3-213ENST00000483684 PPP1R15AO75807 674 aaPredicted RBP8.41□□□□□ -1.06
COMMD3-213ENST00000483684 ABL1P00519 1130 aa8.41□□□□□ -1.06
COMMD3-213ENST00000483684 BNIP3Q12983 259 aa8.41□□□□□ -1.06
COMMD3-213ENST00000483684 AP3B2Q13367 1082 aa8.41□□□□□ -1.06
COMMD3-213ENST00000483684 ECM1Q16610 540 aa8.41□□□□□ -1.06
COMMD3-213ENST00000483684 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
COMMD3-213ENST00000483684 CRIM1Q9NZV1 1036 aa8.41□□□□□ -1.06
COMMD3-213ENST00000483684 BIN1O00499 593 aa8.4□□□□□ -1.06
COMMD3-213ENST00000483684 PDE3AQ14432 1141 aa8.4□□□□□ -1.06
COMMD3-213ENST00000483684 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
COMMD3-213ENST00000483684 CD8BP10966 210 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 FUT4P22083 530 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 ZNF648Q5T619 568 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-213ENST00000483684 ATG4DQ86TL0 474 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-213ENST00000483684 PLD6Q8N2A8 252 aaKnown RBP8.39□□□□□ -1.07
COMMD3-213ENST00000483684 GLIS3Q8NEA6 775 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 NETO1Q8TDF5 533 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-213ENST00000483684 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 EHD4Q9H223 541 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
COMMD3-213ENST00000483684 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
COMMD3-213ENST00000483684 ICMTO60725 284 aa8.38□□□□□ -1.07
COMMD3-213ENST00000483684 NEFLP07196 543 aa8.38□□□□□ -1.07
COMMD3-213ENST00000483684 LIG1P18858 919 aa8.38□□□□□ -1.07
COMMD3-213ENST00000483684 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
COMMD3-213ENST00000483684 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
COMMD3-213ENST00000483684 PCDHGC5Q9Y5F6 944 aa8.38□□□□□ -1.07
COMMD3-213ENST00000483684 U3KQE9 123 aa8.38□□□□□ -1.07
COMMD3-213ENST00000483684 ZNF862O60290 1169 aa8.37□□□□□ -1.07
COMMD3-213ENST00000483684 RNASE1P07998 156 aaKnown RBP8.37□□□□□ -1.07
COMMD3-213ENST00000483684 FAM87AP0C7U9 286 aa8.37□□□□□ -1.07
COMMD3-213ENST00000483684 CDK5R2Q13319 367 aa8.37□□□□□ -1.07
COMMD3-213ENST00000483684 RPS26P11Q5JNZ5 115 aaPredicted RBP8.37□□□□□ -1.07
COMMD3-213ENST00000483684 FAM129BQ96TA1 746 aa8.37□□□□□ -1.07
COMMD3-213ENST00000483684 VAV3Q9UKW4 847 aa8.37□□□□□ -1.07
COMMD3-213ENST00000483684 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
COMMD3-213ENST00000483684 CPNE3O75131 537 aaKnown RBP8.36□□□□□ -1.07
COMMD3-213ENST00000483684 PRKCQQ04759 706 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 FAAP100Q0VG06 881 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 ORC1Q13415 861 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 ATXN3LQ9H3M9 355 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
COMMD3-213ENST00000483684 ADAMTS6Q9UKP5 1117 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 BRPF3Q9ULD4 1205 aa8.36□□□□□ -1.07
COMMD3-213ENST00000483684 ID3Q02535 119 aa8.35□□□□□ -1.07
COMMD3-213ENST00000483684 KIF4BQ2VIQ3 1234 aa8.35□□□□□ -1.07
COMMD3-213ENST00000483684 FAM181AQ8N9Y4 354 aa8.35□□□□□ -1.07
COMMD3-213ENST00000483684 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
COMMD3-213ENST00000483684 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
COMMD3-213ENST00000483684 DBX1A6NMT0 343 aa8.34□□□□□ -1.07
COMMD3-213ENST00000483684 SMYD4Q8IYR2 804 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-213ENST00000483684 FAM168AQ92567 244 aa8.34□□□□□ -1.07
COMMD3-213ENST00000483684 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
COMMD3-213ENST00000483684 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-213ENST00000483684 IGHA2P01877 340 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 SLFN14P0C7P3 912 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 ZNF124Q15973 351 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
COMMD3-213ENST00000483684 LEFTY1O75610 366 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 GSTP1P09211 210 aaKnown RBP8.32□□□□□ -1.08
COMMD3-213ENST00000483684 CD96P40200 585 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 OXCT1P55809 520 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 IFI16Q16666 785 aaKnown RBP8.32□□□□□ -1.08
COMMD3-213ENST00000483684 LRRN4CLQ8ND94 238 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 CCDC74AQ96AQ1 378 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 KRTAP4-5Q9BYR2 181 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 ZC3H12CQ9C0D7 883 aaKnown RBP8.32□□□□□ -1.08
COMMD3-213ENST00000483684 PLAGL2Q9UPG8 496 aa8.32□□□□□ -1.08
COMMD3-213ENST00000483684 H3BRB1 525 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 ZNF157P51786 506 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-213ENST00000483684 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 TTLL4Q14679 1199 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 SPOCD1Q6ZMY3 1216 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 DUSP23Q9BVJ7 150 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 DNAJC25Q9H1X3 360 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 TUT1Q9H6E5 874 aaKnown RBP8.31□□□□□ -1.08
COMMD3-213ENST00000483684 PCOLCE2Q9UKZ9 415 aa8.31□□□□□ -1.08
COMMD3-213ENST00000483684 CEACAM5P06731 702 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms