RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
HMG20B-210ENST00000483417 TEKT1Q969V4 418 aa11.8□□□□□ -0.52
HMG20B-210ENST00000483417 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
HMG20B-210ENST00000483417 CLMNQ96JQ2 1002 aa11.8□□□□□ -0.52
HMG20B-210ENST00000483417 DBNLQ9UJU6 430 aaKnown RBP11.8□□□□□ -0.52
HMG20B-210ENST00000483417 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 TNFAIP1Q13829 316 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 FKBP1CQ5VVH2 108 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 CCDC102BQ68D86 513 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 AACSQ86V21 672 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 KIF1BPQ96EK5 621 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 CFHR5Q9BXR6 569 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 MCOLN1Q9GZU1 580 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
HMG20B-210ENST00000483417 SEMA3EO15041 775 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 NEFLP07196 543 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 GJA5P36382 358 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 CACNB3P54284 484 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 INHBEP58166 350 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
HMG20B-210ENST00000483417 NOM1Q5C9Z4 860 aaKnown RBP11.78□□□□□ -0.52
HMG20B-210ENST00000483417 PI16Q6UXB8 463 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
HMG20B-210ENST00000483417 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 WNK4Q96J92 1243 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
HMG20B-210ENST00000483417 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
HMG20B-210ENST00000483417 TBC1D8O95759 1140 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 ZBTB48P10074 688 aaPredicted RBP11.77□□□□□ -0.53
HMG20B-210ENST00000483417 PRDX5P30044 214 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
HMG20B-210ENST00000483417 TNNI2P48788 182 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 ANKRD13AQ8IZ07 590 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 GCC1Q96CN9 775 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 R3HDMLQ9H3Y0 253 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 SNRKQ9NRH2 765 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
HMG20B-210ENST00000483417 DENND2AQ9ULE3 1009 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 MAST3O60307 1309 aa11.77□□□□□ -0.53
HMG20B-210ENST00000483417 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
HMG20B-210ENST00000483417 PDE4AP27815 886 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 NUCB1Q02818 461 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 SREBF2Q12772 1141 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 DGKZQ13574 1117 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 DIXDC1Q155Q3 683 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 CLASRPQ8N2M8 674 aaKnown RBP11.76□□□□□ -0.53
HMG20B-210ENST00000483417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMG20B-210ENST00000483417 DAGLAQ9Y4D2 1042 aa11.76□□□□□ -0.53
HMG20B-210ENST00000483417 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
HMG20B-210ENST00000483417 GPR25O00155 361 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 MCAMP43121 646 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 RASGRF1Q13972 1273 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 ZNF296Q8WUU4 475 aaPredicted RBP11.75□□□□□ -0.53
HMG20B-210ENST00000483417 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
HMG20B-210ENST00000483417 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 PTPN18Q99952 460 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 HMG20BQ9P0W2 317 aa11.75□□□□□ -0.53
HMG20B-210ENST00000483417 LAMB1P07942 1786 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMG20B-210ENST00000483417 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
HMG20B-210ENST00000483417 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
HMG20B-210ENST00000483417 RGS19P49795 217 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 EDC3Q96F86 508 aaKnown RBP11.74□□□□□ -0.53
HMG20B-210ENST00000483417 CCDC136Q96JN2 1154 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 BOLA2Q9H3K6 86 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
HMG20B-210ENST00000483417 CCDC85CA6NKD9 419 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 GAKO14976 1311 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 ALDH1A1P00352 501 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 ARID4AP29374 1257 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-210ENST00000483417 ZAP70P43403 619 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 NFIAQ12857 509 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 VGLL4Q14135 290 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 CCDC158Q5M9N0 1113 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 TTC39AQ5SRH9 613 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 CTU1Q7Z7A3 348 aaKnown RBP11.73□□□□□ -0.53
HMG20B-210ENST00000483417 ZFPM1Q8IX07 1006 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 SALL3Q9BXA9 1300 aa11.73□□□□□ -0.53
HMG20B-210ENST00000483417 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms