RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 DDX54Q8TDD1 881 aaKnown RBP8.22□□□□□ -1.09
SGIP1-210ENST00000483060 FAM84AQ96KN4 292 aa8.22□□□□□ -1.09
SGIP1-210ENST00000483060 CORO1BQ9BR76 489 aa8.22□□□□□ -1.09
SGIP1-210ENST00000483060 LATS2Q9NRM7 1088 aa8.22□□□□□ -1.09
SGIP1-210ENST00000483060 MBNL3Q9NUK0 354 aaKnown RBP8.22□□□□□ -1.09
SGIP1-210ENST00000483060 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
SGIP1-210ENST00000483060 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
SGIP1-210ENST00000483060 A0A096LPE4 126 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 A0A1W2PPZ6 126 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 METTL12A8MUP2 240 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 DYNC1LI2O43237 492 aaPredicted RBP8.21□□□□□ -1.1
SGIP1-210ENST00000483060 USP5P45974 858 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 ZNF423Q2M1K9 1284 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 PI4K2BQ8TCG2 481 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
SGIP1-210ENST00000483060 SYNGAP1Q96PV0 1343 aa8.21□□□□□ -1.1
SGIP1-210ENST00000483060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.2□□□□□ -1.1
SGIP1-210ENST00000483060 MPSTP25325 297 aa8.2□□□□□ -1.1
SGIP1-210ENST00000483060 PRKCQQ04759 706 aa8.2□□□□□ -1.1
SGIP1-210ENST00000483060 PLD6Q8N2A8 252 aaKnown RBP8.2□□□□□ -1.1
SGIP1-210ENST00000483060 FOXD3Q9UJU5 478 aaPredicted RBP8.2□□□□□ -1.1
SGIP1-210ENST00000483060 LRRN4CLQ8ND94 238 aa8.19□□□□□ -1.1
SGIP1-210ENST00000483060 SLAIN2Q9P270 581 aa8.19□□□□□ -1.1
SGIP1-210ENST00000483060 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
SGIP1-210ENST00000483060 MESP2Q0VG99 397 aa8.18□□□□□ -1.1
SGIP1-210ENST00000483060 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
SGIP1-210ENST00000483060 LGR6Q9HBX8 967 aa8.18□□□□□ -1.1
SGIP1-210ENST00000483060 FAM53CQ9NYF3 392 aa8.18□□□□□ -1.1
SGIP1-210ENST00000483060 KRTAP9-7A8MTY7 169 aa8.17□□□□□ -1.1
SGIP1-210ENST00000483060 AOC2O75106 756 aa8.17□□□□□ -1.1
SGIP1-210ENST00000483060 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
SGIP1-210ENST00000483060 ARID3AQ99856 593 aa8.17□□□□□ -1.1
SGIP1-210ENST00000483060 TRIM56Q9BRZ2 755 aaKnown RBP8.17□□□□□ -1.1
SGIP1-210ENST00000483060 MKNK2Q9HBH9 465 aa8.17□□□□□ -1.1
SGIP1-210ENST00000483060 ZFYVE28Q9HCC9 887 aa8.17□□□□□ -1.1
SGIP1-210ENST00000483060 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
SGIP1-210ENST00000483060 FAM87AP0C7U9 286 aa8.16□□□□□ -1.1
SGIP1-210ENST00000483060 AAMPQ13685 434 aa8.16□□□□□ -1.1
SGIP1-210ENST00000483060 IFI16Q16666 785 aaKnown RBP8.16□□□□□ -1.1
SGIP1-210ENST00000483060 TOX2Q96NM4 488 aa8.16□□□□□ -1.1
SGIP1-210ENST00000483060 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
SGIP1-210ENST00000483060 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.1
SGIP1-210ENST00000483060 PDE3AQ14432 1141 aa8.15□□□□□ -1.1
SGIP1-210ENST00000483060 FAM181AQ8N9Y4 354 aa8.15□□□□□ -1.1
SGIP1-210ENST00000483060 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
SGIP1-210ENST00000483060 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
SGIP1-210ENST00000483060 LIN7BQ9HAP6 207 aa8.15□□□□□ -1.1
SGIP1-210ENST00000483060 ECEL1O95672 775 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 B3GALT4O96024 378 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 GRIA4P48058 902 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 AOC3Q16853 763 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 SPRED3Q2MJR0 410 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 ANGEL2Q5VTE6 544 aaKnown RBP8.14□□□□□ -1.11
SGIP1-210ENST00000483060 FLAD1Q8NFF5 587 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 GTF3C2Q8WUA4 911 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-210ENST00000483060 TCF12Q99081 682 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 PPP1R9AQ9ULJ8 1098 aa8.14□□□□□ -1.11
SGIP1-210ENST00000483060 TMEM265A0A087WTH1 108 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 A0A1W2PP55 124 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 NPR3P17342 541 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 RAP1GAPP47736 663 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 CDK5R2Q13319 367 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 SLC23A3Q6PIS1 610 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 ZSWIM9Q86XI8 627 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 ZSCAN18Q8TBC5 510 aaPredicted RBP8.13□□□□□ -1.11
SGIP1-210ENST00000483060 PIDD1Q9HB75 910 aa8.13□□□□□ -1.11
SGIP1-210ENST00000483060 CD96P40200 585 aa8.12□□□□□ -1.11
SGIP1-210ENST00000483060 AP3B2Q13367 1082 aa8.12□□□□□ -1.11
SGIP1-210ENST00000483060 CILP2Q8IUL8 1156 aa8.12□□□□□ -1.11
SGIP1-210ENST00000483060 GALNT12Q8IXK2 581 aa8.12□□□□□ -1.11
SGIP1-210ENST00000483060 PPP1R16BQ96T49 567 aa8.12□□□□□ -1.11
SGIP1-210ENST00000483060 ATXN3LQ9H3M9 355 aa8.12□□□□□ -1.11
SGIP1-210ENST00000483060 TMPRSS2O15393 492 aa8.11□□□□□ -1.11
SGIP1-210ENST00000483060 FAM13AO94988 1023 aa8.11□□□□□ -1.11
SGIP1-210ENST00000483060 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
SGIP1-210ENST00000483060 CEACAM5P06731 702 aa8.11□□□□□ -1.11
SGIP1-210ENST00000483060 ZNF865P0CJ78 1059 aaPredicted RBP8.11□□□□□ -1.11
SGIP1-210ENST00000483060 PBXIP1Q96AQ6 731 aa8.11□□□□□ -1.11
SGIP1-210ENST00000483060 CRIM1Q9NZV1 1036 aa8.11□□□□□ -1.11
SGIP1-210ENST00000483060 TSPAN15O95858 294 aa8.1□□□□□ -1.11
SGIP1-210ENST00000483060 HNRNPUQ00839 825 aaKnown RBP eCLIP8.1□□□□□ -1.11
SGIP1-210ENST00000483060 KCNMB1Q16558 191 aa8.1□□□□□ -1.11
SGIP1-210ENST00000483060 MLANAQ16655 118 aa8.1□□□□□ -1.11
SGIP1-210ENST00000483060 GJD3Q8N144 294 aa8.1□□□□□ -1.11
SGIP1-210ENST00000483060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.1□□□□□ -1.11
SGIP1-210ENST00000483060 SLFN14P0C7P3 912 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 CFPP27918 469 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 OXCT1P55809 520 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 LCE5AQ5TCM9 118 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 LILRA6Q6PI73 481 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 SIAH1Q8IUQ4 282 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 SMYD4Q8IYR2 804 aaPredicted RBP8.09□□□□□ -1.11
SGIP1-210ENST00000483060 FANCD2OSQ96PS1 177 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 ZNF576Q9H609 170 aa8.09□□□□□ -1.11
SGIP1-210ENST00000483060 FZD6O60353 706 aa8.08□□□□□ -1.12
SGIP1-210ENST00000483060 ID3Q02535 119 aa8.08□□□□□ -1.12
SGIP1-210ENST00000483060 FAM9AQ8IZU1 332 aaPredicted RBP8.08□□□□□ -1.12
SGIP1-210ENST00000483060 SNX11Q9Y5W9 270 aa8.08□□□□□ -1.12
SGIP1-210ENST00000483060 U3KQE9 123 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms