RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 HHIPL2Q6UWX4 724 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 AGBL3Q8NEM8 1001 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 SDR42E1Q8WUS8 393 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 GMLQ99445 158 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 GJA3Q9Y6H8 435 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-205ENST00000482968 GAKO14976 1311 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 GSG1L2A8MUP6 293 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 FGAP02671 866 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 PPP4CP60510 307 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 SH3RF3Q8TEJ3 882 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-205ENST00000482968 MRIQ9BWK5 157 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 HDLBPQ00341 1268 aaKnown RBP17.96■□□□□ 0.47
PHGDH-205ENST00000482968 C9orf131Q5VYM1 1079 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 OGFOD1Q8N543 542 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 CRNKL1Q9BZJ0 848 aaKnown RBP17.96■□□□□ 0.47
PHGDH-205ENST00000482968 PALD1Q9ULE6 856 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 PCDHAC2Q9Y5I4 1007 aa17.96■□□□□ 0.47
PHGDH-205ENST00000482968 USP17L8P0C7I0 530 aa17.95■□□□□ 0.46
PHGDH-205ENST00000482968 CREB3L3Q68CJ9 461 aa17.95■□□□□ 0.46
PHGDH-205ENST00000482968 IFNL3Q8IZI9 196 aa17.95■□□□□ 0.46
PHGDH-205ENST00000482968 ZNF541Q9H0D2 1346 aa17.95■□□□□ 0.46
PHGDH-205ENST00000482968 SERPINA10Q9UK55 444 aa17.95■□□□□ 0.46
PHGDH-205ENST00000482968 HDAC9Q9UKV0 1011 aa17.95■□□□□ 0.46
PHGDH-205ENST00000482968 ZDHHC15Q96MV8 337 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 CTNNA3Q9UI47 895 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 ADAMTSL1Q8N6G6 1762 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 SLC27A2O14975 620 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 PLCG2P16885 1265 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 CFAP100Q494V2 611 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 APOBEC3HQ6NTF7 200 aaKnown RBP17.94■□□□□ 0.46
PHGDH-205ENST00000482968 RASEFQ8IZ41 740 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 NAPBQ9H115 298 aa17.94■□□□□ 0.46
PHGDH-205ENST00000482968 EPB41L4AQ9HCS5 686 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-205ENST00000482968 USP5P45974 858 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 TDO2P48775 406 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 RHBDL3P58872 404 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 RNF20Q5VTR2 975 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 TGFBRAP1Q8WUH2 860 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 KIF2CQ99661 725 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 USP40Q9NVE5 1235 aa17.93■□□□□ 0.46
PHGDH-205ENST00000482968 SHTN1A0MZ66 631 aa17.92■□□□□ 0.46
PHGDH-205ENST00000482968 CYP21A2P08686 494 aa17.92■□□□□ 0.46
PHGDH-205ENST00000482968 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-205ENST00000482968 RPS12P25398 132 aaKnown RBP17.92■□□□□ 0.46
PHGDH-205ENST00000482968 GMPSP49915 693 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-205ENST00000482968 ALX1Q15699 326 aa17.92■□□□□ 0.46
PHGDH-205ENST00000482968 TEX11Q8IYF3 940 aa17.92■□□□□ 0.46
PHGDH-205ENST00000482968 SNX14Q9Y5W7 946 aa17.92■□□□□ 0.46
PHGDH-205ENST00000482968 RPAP1Q9BWH6 1393 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-205ENST00000482968 HAND2P61296 217 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 IMMTQ16891 758 aaKnown RBP17.91■□□□□ 0.46
PHGDH-205ENST00000482968 CDC42EP5Q6NZY7 148 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 PRMT6Q96LA8 375 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-205ENST00000482968 DCP1AQ9NPI6 582 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-205ENST00000482968 ATP8A2Q9NTI2 1148 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 ZNF213O14771 459 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 ANAPC15P60006 121 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 GPC2Q8N158 579 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 DPF2Q92785 391 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 KCNB2Q92953 911 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 DDRGK1Q96HY6 314 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 CNOT7Q9UIV1 285 aaKnown RBP17.91■□□□□ 0.46
PHGDH-205ENST00000482968 TAF6LQ9Y6J9 622 aa17.91■□□□□ 0.46
PHGDH-205ENST00000482968 BAZ2AQ9UIF9 1905 aaKnown RBP17.9■□□□□ 0.46
PHGDH-205ENST00000482968 MAPKAPK5Q8IW41 473 aa17.9■□□□□ 0.46
PHGDH-205ENST00000482968 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
PHGDH-205ENST00000482968 DDNO94850 711 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-205ENST00000482968 RBM26Q5T8P6 1007 aaKnown RBP17.89■□□□□ 0.45
PHGDH-205ENST00000482968 GIMAP6Q6P9H5 292 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 MICALL2Q8IY33 904 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 MINDY4BA8MYZ0 360 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 USP17L12C9JPN9 530 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 USP17L21D6R901 530 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 PICALMQ13492 652 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 ADCK5Q3MIX3 580 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 CTR9Q6PD62 1173 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
PHGDH-205ENST00000482968 MKRN1Q9UHC7 482 aaKnown RBP17.89■□□□□ 0.45
PHGDH-205ENST00000482968 CDK5RAP2Q96SN8 1893 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 TIAM2Q8IVF5 1701 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 ZMYM6O95789 1325 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 CYP2D7A0A087X1C5 515 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 SPDYE2BA6NHP3 402 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 SPDYE6P0CI01 402 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 CACNB3P54284 484 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 SLC4A8Q2Y0W8 1093 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 TSGA10IPQ3SY00 556 aa17.88■□□□□ 0.45
PHGDH-205ENST00000482968 WDHD1O75717 1129 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-205ENST00000482968 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-205ENST00000482968 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
PHGDH-205ENST00000482968 SAMD7Q7Z3H4 446 aa17.87■□□□□ 0.45
PHGDH-205ENST00000482968 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
PHGDH-205ENST00000482968 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
PHGDH-205ENST00000482968 H7C1D1 291 aa17.86■□□□□ 0.45
PHGDH-205ENST00000482968 MMP14P50281 582 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms