RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 JAG2Q9Y219 1238 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 A0A0C4DFX4 3053 aa14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 COL1A1P02452 1464 aaPredicted RBP14.89□□□□□ -0.03
TSPAN1-208ENST00000482928 GPAA1O43292 621 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 CHGBP05060 677 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 IL1R1P14778 569 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 SLFNL1Q499Z3 407 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 MAP4K1Q92918 833 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 DSCC1Q9BVC3 393 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 TRPM7Q96QT4 1865 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
TSPAN1-208ENST00000482928 MAGEB6P1A0A0J9YX57 407 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 GNAT2P19087 354 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 PSMA5P28066 241 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 DOK7Q18PE1 504 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 SLF2Q8IX21 1173 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 IL27Q8NEV9 243 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 PUS7LQ9H0K6 701 aaKnown RBP14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 MAST2Q6P0Q8 1798 aa14.87□□□□□ -0.03
TSPAN1-208ENST00000482928 PPIP5K2O43314 1243 aa14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 DDNO94850 711 aaPredicted RBP14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 MBD4O95243 580 aa14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 LDHCP07864 332 aa14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 KRT32Q14532 448 aa14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 CREB3L3Q68CJ9 461 aa14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 NACAP1Q9BZK3 213 aa14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
TSPAN1-208ENST00000482928 TCRBV5S4A2TA0A5A2 114 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 SLC27A2O14975 620 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 HSPD1P10809 573 aaKnown RBP14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 GTF2IP78347 998 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 MECOMQ03112 1051 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 IMMTQ16891 758 aaKnown RBP14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 MFSD14BQ5SR56 506 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 PODNQ7Z5L7 613 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 MIGA1Q8NAN2 632 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 RTFDC1Q9BY42 306 aaPredicted RBP14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 TAF1DQ9H5J8 278 aaPredicted RBP14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 PALD1Q9ULE6 856 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 SNX14Q9Y5W7 946 aa14.85□□□□□ -0.03
TSPAN1-208ENST00000482928 MYO5AQ9Y4I1 1855 aaKnown RBP14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 NEK4P51957 841 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 NECTIN1Q15223 517 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 AOC3Q16853 763 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 C7orf43Q8WVR3 580 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 JAKMIP1Q96N16 626 aaKnown RBP14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 ARMT1Q9H993 441 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 DBNDD1Q9H9R9 158 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 SLC4A4Q9Y6R1 1079 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 FAM205AQ6ZU69 1335 aa14.84□□□□□ -0.03
TSPAN1-208ENST00000482928 ECE2O60344 883 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 BAG3O95817 575 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 HSP90AA1P07900 732 aaKnown RBP14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 PRDX5P30044 214 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 TDO2P48775 406 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 KIAA2012Q0VF49 1180 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 VPS53Q5VIR6 699 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 TTLL5Q6EMB2 1281 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 LARGE2Q8N3Y3 721 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 PSMD1Q99460 953 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 KIF2CQ99661 725 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 NAPBQ9H115 298 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 CYP46A1Q9Y6A2 500 aa14.83□□□□□ -0.04
TSPAN1-208ENST00000482928 COL6A3P12111 3177 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 ZNF213O14771 459 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 MCM2P49736 904 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 MAP1SQ66K74 1059 aaPredicted RBP14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 CERS3Q8IU89 383 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 LCORLQ8N3X6 602 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 SNX21Q969T3 373 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 STRBPQ96SI9 672 aaKnown RBP14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 CRNKL1Q9BZJ0 848 aaKnown RBP14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 VPS33BQ9H267 617 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 HPS5Q9UPZ3 1129 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 SUGT1Q9Y2Z0 365 aa14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 RPAP1Q9BWH6 1393 aaPredicted RBP14.82□□□□□ -0.04
TSPAN1-208ENST00000482928 TRIOBPQ9H2D6 2365 aa14.81□□□□□ -0.04
TSPAN1-208ENST00000482928 NFKBIEO00221 500 aa14.81□□□□□ -0.04
TSPAN1-208ENST00000482928 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
TSPAN1-208ENST00000482928 TBC1D2Q9BYX2 928 aa14.81□□□□□ -0.04
TSPAN1-208ENST00000482928 TAOK3Q9H2K8 898 aa14.81□□□□□ -0.04
TSPAN1-208ENST00000482928 USP17L3A6NCW0 530 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 USP17L4A6NCW7 530 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 HMGB1P09429 215 aaKnown RBP14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 PLCG2P16885 1265 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 TRDNQ13061 729 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 USP17L1Q7RTZ2 530 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 NIM1KQ8IY84 436 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 KCNB2Q92953 911 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 COL25A1Q9BXS0 654 aaPredicted RBP14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 TM6SF1Q9BZW5 370 aa14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
TSPAN1-208ENST00000482928 MROH7-TTC4A0A0A0MT08 1334 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms