RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 CCDC186Q7Z3E2 898 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 ANGEL1Q9UNK9 670 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 CARMIL3Q8ND23 1372 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 USP54Q70EL1 1684 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 POLD1P28340 1107 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 ALS2Q96Q42 1657 aa13.93□□□□□ -0.18
RAPGEF3-210ENST00000482843 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 CYB5R4Q7L1T6 521 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 AP5Z1O43299 807 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 ITPK1Q13572 414 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 UBE2Q2LH0YL09 131 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 SART3Q15020 963 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 ALDH8A1Q9H2A2 487 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 NRBP1Q9UHY1 535 aa13.92□□□□□ -0.18
RAPGEF3-210ENST00000482843 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 ANTXR2P58335 489 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 AKAP17AQ02040 695 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 CHRNDQ07001 517 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 SPECC1Q5M775 1068 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 IFNL3Q8IZI9 196 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 TSC1Q92574 1164 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 GOLPH3LQ9H4A5 285 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 TFCP2L1Q9NZI6 479 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 ELP1O95163 1332 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 SPTLC2O15270 562 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 KCTD17Q8N5Z5 321 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 HSP90AA4PQ58FG1 418 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 CLIP2Q9UDT6 1046 aa13.91□□□□□ -0.18
RAPGEF3-210ENST00000482843 ZNF500O60304 480 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 SMC2O95347 1197 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 LRMPQ12912 555 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 LCORLQ8N3X6 602 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 CDC5LQ99459 802 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 ERFEQ4G0M1 354 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 FBXO18Q8NFZ0 1043 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 NKX2-3Q8TAU0 364 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 STRBPQ96SI9 672 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 PLA2G12BQ9BX93 195 aa13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 GNL3LQ9NVN8 582 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 PHRF1Q9P1Y6 1649 aaKnown RBP13.9□□□□□ -0.18
RAPGEF3-210ENST00000482843 FOXP2O15409 715 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 PDILTQ8N807 584 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 ZSWIM5Q9P217 1185 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 KCNJ14Q9UNX9 436 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 NEDD4P46934 1319 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 STRCP1A6NGW2 1772 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 ERVV-1B6SEH8 477 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 MAFGO15525 162 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 CDKL5O76039 1030 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 NDUFA8P51970 172 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 SGSM3Q96HU1 749 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 FAM160A1Q05DH4 1040 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 UBE3CQ15386 1083 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
RAPGEF3-210ENST00000482843 ZPR1O75312 459 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 WTAPQ15007 396 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 MYSM1Q5VVJ2 828 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 KRT40Q6A162 431 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 PYCARDQ9ULZ3 195 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 CDC27P30260 824 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 STX1AQ16623 288 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 C16orf45Q96MC5 204 aaPredicted RBP13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 GNPATO15228 680 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 SLC3A2P08195 630 aaKnown RBP13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
RAPGEF3-210ENST00000482843 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
RAPGEF3-210ENST00000482843 KIF28PB7ZC32 967 aa13.87□□□□□ -0.19
RAPGEF3-210ENST00000482843 BCL9O00512 1426 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms