RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 TCRBV5S4A2TA0A5A2 114 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 SHTN1A0MZ66 631 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
HPS4-212ENST00000481910 CRKP46108 304 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 MMP14P50281 582 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 CWC27Q6UX04 472 aaKnown RBP13.94□□□□□ -0.18
HPS4-212ENST00000481910 ADGRA1Q86SQ6 560 aa13.94□□□□□ -0.18
HPS4-212ENST00000481910 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 CDC45O75419 566 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 CHMLP26374 656 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 EPS15P42566 896 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 ZNF280AP59817 542 aaPredicted RBP13.93□□□□□ -0.18
HPS4-212ENST00000481910 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 RBM26Q5T8P6 1007 aaKnown RBP13.93□□□□□ -0.18
HPS4-212ENST00000481910 APPBP2Q92624 585 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
HPS4-212ENST00000481910 L3MBTL3Q96JM7 780 aaPredicted RBP13.93□□□□□ -0.18
HPS4-212ENST00000481910 MYOZ2Q9NPC6 264 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
HPS4-212ENST00000481910 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
HPS4-212ENST00000481910 DLGAP5Q15398 846 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 MIGA1Q8NAN2 632 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 FAM227BQ96M60 508 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 ZDHHC15Q96MV8 337 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 NOL10Q9BSC4 688 aaKnown RBP13.92□□□□□ -0.18
HPS4-212ENST00000481910 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
HPS4-212ENST00000481910 MAST2Q6P0Q8 1798 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 BAG3O95817 575 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 NCLP19338 710 aaKnown RBP13.92□□□□□ -0.18
HPS4-212ENST00000481910 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
HPS4-212ENST00000481910 HELLSQ9NRZ9 838 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 AATFQ9NY61 560 aaKnown RBP eCLIP13.92□□□□□ -0.18
HPS4-212ENST00000481910 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
HPS4-212ENST00000481910 GAKO14976 1311 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 GPR75-ASB3A0A0A6YYF3 556 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 A0A0D9SFI3 127 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 MAGEB6P1A0A0J9YX57 407 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 BTDP43251 543 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 TBC1D10BQ4KMP7 808 aaPredicted RBP13.91□□□□□ -0.18
HPS4-212ENST00000481910 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 AIDAQ96BJ3 306 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
HPS4-212ENST00000481910 HACL1Q9UJ83 578 aa13.91□□□□□ -0.18
HPS4-212ENST00000481910 IQCA1LA6NCM1 817 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 EGFRP00533 1210 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
HPS4-212ENST00000481910 ADAMTSL1Q8N6G6 1762 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 M0R2C6 588 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
HPS4-212ENST00000481910 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
HPS4-212ENST00000481910 ZNF526Q8TF50 670 aaPredicted RBP13.9□□□□□ -0.18
HPS4-212ENST00000481910 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
HPS4-212ENST00000481910 WNT10BO00744 389 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 MYO1BO43795 1136 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 MBD4O95243 580 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 PLCG2P16885 1265 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 PPP4CP60510 307 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 NBPF9Q3BBW0 867 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 RIOK1Q9BRS2 568 aaKnown RBP13.89□□□□□ -0.19
HPS4-212ENST00000481910 TDRD3Q9H7E2 651 aaKnown RBP13.89□□□□□ -0.19
HPS4-212ENST00000481910 ARMT1Q9H993 441 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 SCN4AP35499 1836 aa13.89□□□□□ -0.19
HPS4-212ENST00000481910 POTECB2RU33 542 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 GPAA1O43292 621 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 EPHX2P34913 555 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 USP40Q9NVE5 1235 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 WDR90Q96KV7 1748 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
HPS4-212ENST00000481910 CDC42EP5Q6NZY7 148 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
HPS4-212ENST00000481910 ZNF589Q86UQ0 364 aaPredicted RBP13.88□□□□□ -0.19
HPS4-212ENST00000481910 TRPM4Q8TD43 1214 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
HPS4-212ENST00000481910 ZBED3Q96IU2 234 aaPredicted RBP13.88□□□□□ -0.19
HPS4-212ENST00000481910 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
HPS4-212ENST00000481910 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
HPS4-212ENST00000481910 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 IL25Q9H293 177 aa13.88□□□□□ -0.19
HPS4-212ENST00000481910 SGSM2O43147 1006 aa13.87□□□□□ -0.19
HPS4-212ENST00000481910 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
HPS4-212ENST00000481910 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
HPS4-212ENST00000481910 RHBDL3P58872 404 aa13.87□□□□□ -0.19
HPS4-212ENST00000481910 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
HPS4-212ENST00000481910 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
HPS4-212ENST00000481910 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
HPS4-212ENST00000481910 TEX11Q8IYF3 940 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms