RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 ERO1BQ86YB8 467 aa14.43□□□□□ -0.1
GARNL3-217ENST00000481875 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
GARNL3-217ENST00000481875 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
GARNL3-217ENST00000481875 ELP3Q9H9T3 547 aa14.43□□□□□ -0.1
GARNL3-217ENST00000481875 FRAT2O75474 233 aaPredicted RBP14.42□□□□□ -0.1
GARNL3-217ENST00000481875 ATG9AQ7Z3C6 839 aa14.42□□□□□ -0.1
GARNL3-217ENST00000481875 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
GARNL3-217ENST00000481875 EFCC1Q9HA90 598 aa14.42□□□□□ -0.1
GARNL3-217ENST00000481875 IQSEC3Q9UPP2 1182 aaPredicted RBP14.42□□□□□ -0.1
GARNL3-217ENST00000481875 HDAC5Q9UQL6 1122 aa14.42□□□□□ -0.1
GARNL3-217ENST00000481875 SALL1Q9NSC2 1324 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 CETPP11597 493 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 SLC5A1P13866 664 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 CCL15Q16663 113 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 ZFYVE28Q9HCC9 887 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 TMOD2Q9NZR1 351 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 ZNF112Q9UJU3 913 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 SNCAIPQ9Y6H5 919 aa14.41□□□□□ -0.1
GARNL3-217ENST00000481875 CEP290O15078 2479 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 SEMA3EO15041 775 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 GNRH1P01148 92 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 CAP1Q01518 475 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 PPATQ06203 517 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 CHAF1AQ13111 956 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-217ENST00000481875 PPIL2Q13356 520 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 DCAF15Q66K64 600 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 CD99L2Q8TCZ2 262 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 FAM151AQ8WW52 585 aa14.4□□□□□ -0.1
GARNL3-217ENST00000481875 AK9Q5TCS8 1911 aa14.39□□□□□ -0.11
GARNL3-217ENST00000481875 TLR2O60603 784 aa14.39□□□□□ -0.11
GARNL3-217ENST00000481875 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-217ENST00000481875 SNAPC2Q13487 334 aa14.39□□□□□ -0.11
GARNL3-217ENST00000481875 TAF1CQ15572 869 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-217ENST00000481875 FAM43AQ8N2R8 423 aa14.39□□□□□ -0.11
GARNL3-217ENST00000481875 IRF6O14896 467 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 WDHD1O75717 1129 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-217ENST00000481875 CACNB3P54284 484 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 WRNIP1Q96S55 665 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 ZNF341Q9BYN7 854 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 GNL3LQ9NVN8 582 aaKnown RBP14.38□□□□□ -0.11
GARNL3-217ENST00000481875 CEP126Q9P2H0 1117 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 MYH2Q9UKX2 1941 aa14.38□□□□□ -0.11
GARNL3-217ENST00000481875 PDS5AQ29RF7 1337 aaKnown RBP14.38□□□□□ -0.11
GARNL3-217ENST00000481875 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 UBTFL1P0CB47 393 aaPredicted RBP14.37□□□□□ -0.11
GARNL3-217ENST00000481875 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
GARNL3-217ENST00000481875 PRMT2P55345 433 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 NBPF11Q86T75 865 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 ZNF333Q96JL9 665 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 KCNH4Q9UQ05 1017 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 DAGLAQ9Y4D2 1042 aa14.37□□□□□ -0.11
GARNL3-217ENST00000481875 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
GARNL3-217ENST00000481875 MAP3K10Q02779 954 aa14.36□□□□□ -0.11
GARNL3-217ENST00000481875 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
GARNL3-217ENST00000481875 NOL9Q5SY16 702 aaKnown RBP14.36□□□□□ -0.11
GARNL3-217ENST00000481875 CDC42EP5Q6NZY7 148 aa14.36□□□□□ -0.11
GARNL3-217ENST00000481875 ZKSCAN4Q969J2 545 aaPredicted RBP14.36□□□□□ -0.11
GARNL3-217ENST00000481875 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
GARNL3-217ENST00000481875 API5Q9BZZ5 524 aaKnown RBP14.36□□□□□ -0.11
GARNL3-217ENST00000481875 DENND2AQ9ULE3 1009 aa14.36□□□□□ -0.11
GARNL3-217ENST00000481875 LDHBP07195 334 aaKnown RBP14.35□□□□□ -0.11
GARNL3-217ENST00000481875 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
GARNL3-217ENST00000481875 MTX1Q13505 466 aa14.35□□□□□ -0.11
GARNL3-217ENST00000481875 C17orf99Q6UX52 265 aa14.35□□□□□ -0.11
GARNL3-217ENST00000481875 ANKRD23Q86SG2 305 aa14.35□□□□□ -0.11
GARNL3-217ENST00000481875 ZGPATQ8N5A5 531 aaKnown RBP14.35□□□□□ -0.11
GARNL3-217ENST00000481875 IDI2Q9BXS1 227 aa14.35□□□□□ -0.11
GARNL3-217ENST00000481875 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.35□□□□□ -0.11
GARNL3-217ENST00000481875 PRDX5P30044 214 aa14.34□□□□□ -0.11
GARNL3-217ENST00000481875 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
GARNL3-217ENST00000481875 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
GARNL3-217ENST00000481875 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
GARNL3-217ENST00000481875 RCAN3Q9UKA8 241 aa14.34□□□□□ -0.11
GARNL3-217ENST00000481875 NOB1Q9ULX3 412 aaKnown RBP14.34□□□□□ -0.11
GARNL3-217ENST00000481875 GAKO14976 1311 aa14.34□□□□□ -0.11
GARNL3-217ENST00000481875 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
GARNL3-217ENST00000481875 CXCL11O14625 94 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 ENTPD3O75355 529 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 INPP5BP32019 993 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 MOGSQ13724 837 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 KIF22Q14807 665 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 MIGA2Q7L4E1 593 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 LRRFIP2Q9Y608 721 aaKnown RBP14.33□□□□□ -0.12
GARNL3-217ENST00000481875 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 PTPRFP10586 1907 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
GARNL3-217ENST00000481875 DOCK2Q92608 1830 aa14.32□□□□□ -0.12
GARNL3-217ENST00000481875 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
GARNL3-217ENST00000481875 CENPBP07199 599 aaPredicted RBP14.32□□□□□ -0.12
GARNL3-217ENST00000481875 PHKA1P46020 1223 aa14.32□□□□□ -0.12
GARNL3-217ENST00000481875 NFIAQ12857 509 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms