RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 A0A1B0GUL7 405 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 TESPA1A2RU30 521 aaPredicted RBP23.01■■□□□ 1.27
CLK1-211ENST00000481641 SEMA3EO15041 775 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 GNAI2P04899 355 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 NFIAQ12857 509 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 CRHR2Q13324 411 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 RASGRF1Q13972 1273 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 ZKSCAN4Q969J2 545 aaPredicted RBP23.01■■□□□ 1.27
CLK1-211ENST00000481641 OTUD5Q96G74 571 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 XAGE2Q96GT9 111 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 WRNIP1Q96S55 665 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 SALL1Q9NSC2 1324 aa23.01■■□□□ 1.27
CLK1-211ENST00000481641 PKN2Q16513 984 aaKnown RBP23■■□□□ 1.27
CLK1-211ENST00000481641 ZKSCAN2Q63HK3 967 aa23■■□□□ 1.27
CLK1-211ENST00000481641 BRI3BPQ8WY22 251 aa23■■□□□ 1.27
CLK1-211ENST00000481641 USP40Q9NVE5 1235 aa23■■□□□ 1.27
CLK1-211ENST00000481641 SNCAIPQ9Y6H5 919 aa23■■□□□ 1.27
CLK1-211ENST00000481641 OTUD7BQ6GQQ9 843 aa22.99■■□□□ 1.27
CLK1-211ENST00000481641 FAM151AQ8WW52 585 aa22.99■■□□□ 1.27
CLK1-211ENST00000481641 NEUROD6Q96NK8 337 aa22.99■■□□□ 1.27
CLK1-211ENST00000481641 AK9Q5TCS8 1911 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 CCL15-CCL14A0A0B4J2E2 113 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 CCL15Q16663 113 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 ZFPM1Q8IX07 1006 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 FAM198AQ9UFP1 575 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 ABCF2Q9UG63 623 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 AKAP2Q9Y2D5 859 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 RPAP1Q9BWH6 1393 aaPredicted RBP22.98■■□□□ 1.27
CLK1-211ENST00000481641 MYH2Q9UKX2 1941 aa22.98■■□□□ 1.27
CLK1-211ENST00000481641 SPDYE5A6NIY4 337 aa22.97■■□□□ 1.27
CLK1-211ENST00000481641 INPP5BP32019 993 aa22.97■■□□□ 1.27
CLK1-211ENST00000481641 FBXO46Q6PJ61 603 aaPredicted RBP22.97■■□□□ 1.27
CLK1-211ENST00000481641 GTF2A2P52657 109 aa22.96■■□□□ 1.27
CLK1-211ENST00000481641 DCAF15Q66K64 600 aa22.96■■□□□ 1.27
CLK1-211ENST00000481641 CD99L2Q8TCZ2 262 aa22.96■■□□□ 1.27
CLK1-211ENST00000481641 HOOK2Q96ED9 719 aa22.96■■□□□ 1.27
CLK1-211ENST00000481641 ZNF341Q9BYN7 854 aa22.96■■□□□ 1.27
CLK1-211ENST00000481641 TRIM17Q9Y577 477 aa22.96■■□□□ 1.27
CLK1-211ENST00000481641 CAP1Q01518 475 aa22.95■■□□□ 1.26
CLK1-211ENST00000481641 G3BP1Q13283 466 aaKnown RBP eCLIP22.95■■□□□ 1.26
CLK1-211ENST00000481641 MVPQ14764 893 aaKnown RBP22.95■■□□□ 1.26
CLK1-211ENST00000481641 PI16Q6UXB8 463 aa22.95■■□□□ 1.26
CLK1-211ENST00000481641 ERO1BQ86YB8 467 aa22.95■■□□□ 1.26
CLK1-211ENST00000481641 DZIP1Q86YF9 867 aaKnown RBP22.95■■□□□ 1.26
CLK1-211ENST00000481641 FAM43AQ8N2R8 423 aa22.95■■□□□ 1.26
CLK1-211ENST00000481641 ZGPATQ8N5A5 531 aaKnown RBP22.95■■□□□ 1.26
CLK1-211ENST00000481641 C1orf115Q9H7X2 142 aa22.95■■□□□ 1.26
CLK1-211ENST00000481641 ZBTB22O15209 634 aa22.94■■□□□ 1.26
CLK1-211ENST00000481641 OTOP1Q7RTM1 612 aa22.94■■□□□ 1.26
CLK1-211ENST00000481641 GAKO14976 1311 aa22.93■■□□□ 1.26
CLK1-211ENST00000481641 IRF6O14896 467 aa22.93■■□□□ 1.26
CLK1-211ENST00000481641 RLBP1P12271 317 aa22.93■■□□□ 1.26
CLK1-211ENST00000481641 RGS3P49796 1198 aa22.93■■□□□ 1.26
CLK1-211ENST00000481641 TAF1CQ15572 869 aaPredicted RBP22.93■■□□□ 1.26
CLK1-211ENST00000481641 HMG20BQ9P0W2 317 aa22.93■■□□□ 1.26
CLK1-211ENST00000481641 PDS5AQ29RF7 1337 aaKnown RBP22.92■■□□□ 1.26
CLK1-211ENST00000481641 TNRC18O15417 2968 aaPredicted RBP22.92■■□□□ 1.26
CLK1-211ENST00000481641 GORABQ5T7V8 394 aa22.92■■□□□ 1.26
CLK1-211ENST00000481641 TBC1D9Q6ZT07 1266 aa22.92■■□□□ 1.26
CLK1-211ENST00000481641 ERO1AQ96HE7 468 aa22.92■■□□□ 1.26
CLK1-211ENST00000481641 SLURP2P0DP57 97 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 BTDP43251 543 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 SP3Q02447 781 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 MECOMQ03112 1051 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 PPIL2Q13356 520 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 POLA2Q14181 598 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 SPTY2D1Q68D10 685 aaPredicted RBP22.91■■□□□ 1.26
CLK1-211ENST00000481641 ERICH6Q7L0X2 663 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 FTSJ3Q8IY81 847 aaKnown RBP22.91■■□□□ 1.26
CLK1-211ENST00000481641 ZNF384Q8TF68 577 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 ZNF112Q9UJU3 913 aa22.91■■□□□ 1.26
CLK1-211ENST00000481641 BTBD19C9JJ37 291 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 CETPP11597 493 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 ATP8B2P98198 1209 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 SH3BP5LQ7L8J4 393 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 ITPRIPQ8IWB1 547 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 SPATA5Q8NB90 893 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 IDI2Q9BXS1 227 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 ZFYVE28Q9HCC9 887 aa22.9■■□□□ 1.26
CLK1-211ENST00000481641 DDX4Q9NQI0 724 aaKnown RBP22.9■■□□□ 1.26
CLK1-211ENST00000481641 MROH7-TTC4A0A0A0MT08 1334 aa22.89■■□□□ 1.26
CLK1-211ENST00000481641 SNAPC2Q13487 334 aa22.89■■□□□ 1.25
CLK1-211ENST00000481641 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.89■■□□□ 1.25
CLK1-211ENST00000481641 FAM163AQ96GL9 167 aaPredicted RBP22.89■■□□□ 1.25
CLK1-211ENST00000481641 HTTP42858 3142 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 WDHD1O75717 1129 aaPredicted RBP22.88■■□□□ 1.25
CLK1-211ENST00000481641 ARID4AP29374 1257 aaPredicted RBP22.88■■□□□ 1.25
CLK1-211ENST00000481641 MCAMP43121 646 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 PPATQ06203 517 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 PICALMQ13492 652 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 ZSCAN29Q8IWY8 852 aaPredicted RBP22.88■■□□□ 1.25
CLK1-211ENST00000481641 SLF2Q8IX21 1173 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 SSH3Q8TE77 659 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 EFCC1Q9HA90 598 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 RFX7Q2KHR2 1363 aa22.88■■□□□ 1.25
CLK1-211ENST00000481641 DDTLA6NHG4 134 aaPredicted RBP22.87■■□□□ 1.25
CLK1-211ENST00000481641 ZBTB7BO15156 539 aaPredicted RBP22.87■■□□□ 1.25
CLK1-211ENST00000481641 ENTPD3O75355 529 aa22.87■■□□□ 1.25
CLK1-211ENST00000481641 OS9Q13438 667 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms