RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 AACSQ86V21 672 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 CSRNP1Q96S65 589 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 PCDHB15Q9Y5E8 787 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 GAKO14976 1311 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 PDS5AQ29RF7 1337 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 MAST3O60307 1309 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 NF2P35240 595 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 MAP2K1Q02750 393 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 NOGQ13253 232 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 SH3BP5LQ7L8J4 393 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 ADGRA1Q86SQ6 560 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 RPAP2Q8IXW5 612 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 TNS4Q8IZW8 715 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 AIDAQ96BJ3 306 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 NSUN4Q96CB9 384 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 ANTXR1Q9H6X2 564 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 DDX4Q9NQI0 724 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 PPP2R3BQ9Y5P8 575 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 AKAP11Q9UKA4 1901 aa14.02□□□□□ -0.17
RAPGEF1-207ENST00000481260 RFX7Q2KHR2 1363 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 BTDP43251 543 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 RHBDL3P58872 404 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 ERICH6Q7L0X2 663 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 MIGA2Q7L4E1 593 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 ARMC9Q7Z3E5 817 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 RAI14Q9P0K7 980 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 OTOFQ9HC10 1997 aa14.01□□□□□ -0.17
RAPGEF1-207ENST00000481260 MROH7-TTC4A0A0A0MT08 1334 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 WDHD1O75717 1129 aaPredicted RBP14□□□□□ -0.17
RAPGEF1-207ENST00000481260 UQCRFS1P1P0C7P4 283 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 CTCFP49711 727 aaPredicted RBP14□□□□□ -0.17
RAPGEF1-207ENST00000481260 MAP3K11Q16584 847 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 SUPT20HL1Q3ZLR7 823 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 EDC3Q96F86 508 aaKnown RBP14□□□□□ -0.17
RAPGEF1-207ENST00000481260 R3HDMLQ9H3Y0 253 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 ELP3Q9H9T3 547 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 RNF186Q9NXI6 227 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 MYH2Q9UKX2 1941 aa14□□□□□ -0.17
RAPGEF1-207ENST00000481260 MYO5AQ9Y4I1 1855 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 RGS3P49796 1198 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 TNFAIP1Q13829 316 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 VGLL4Q14135 290 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 CCDC158Q5M9N0 1113 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 SPRYD7Q5W111 196 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
RAPGEF1-207ENST00000481260 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 DDTLA6NHG4 134 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 PPP1R12BO60237 982 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 TRPA1O75762 1119 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 CHGBP05060 677 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 TNNI2P48788 182 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 PICALMQ13492 652 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 FKBP1CQ5VVH2 108 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 FAM83AQ86UY5 434 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 ERC1Q8IUD2 1116 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 FAM151AQ8WW52 585 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 FAM163AQ96GL9 167 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 ZNF512BQ96KM6 892 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 TMOD2Q9NZR1 351 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 LRP2BPQ9P2M1 347 aa13.98□□□□□ -0.17
RAPGEF1-207ENST00000481260 ATRNL1Q5VV63 1379 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 HMMRO75330 724 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 INPP5BP32019 993 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 DYNLL1P63167 89 aaKnown RBP13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 SPTY2D1Q68D10 685 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
RAPGEF1-207ENST00000481260 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
RAPGEF1-207ENST00000481260 IREB2P48200 963 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-207ENST00000481260 WRNIP1Q96S55 665 aa13.96□□□□□ -0.17
RAPGEF1-207ENST00000481260 IDI2Q9BXS1 227 aa13.96□□□□□ -0.17
RAPGEF1-207ENST00000481260 AATFQ9NY61 560 aaKnown RBP eCLIP13.96□□□□□ -0.17
RAPGEF1-207ENST00000481260 IGF2BP3O00425 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 TBC1D8O95759 1140 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 MAP3K9P80192 1104 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 HSP90AB4PQ58FF6 505 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 NAA16Q6N069 864 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 ANKRD13AQ8IZ07 590 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 MIGA1Q8NAN2 632 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 OTUD7AQ8TE49 926 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 OPTNQ96CV9 577 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 PTPN18Q99952 460 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 BEGAINQ9BUH8 593 aa13.95□□□□□ -0.18
RAPGEF1-207ENST00000481260 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms