RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 GGNBP2Q9H3C7 697 aa8.94□□□□□ -0.98
LRCH3-216ENST00000481048 INSRP06213 1382 aa8.94□□□□□ -0.98
LRCH3-216ENST00000481048 UTRNP46939 3433 aa8.94□□□□□ -0.98
LRCH3-216ENST00000481048 SERTM1A2A2V5 107 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 FBLN1P23142 703 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 POLD1P28340 1107 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 GATA4P43694 442 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
LRCH3-216ENST00000481048 RRS1Q15050 365 aaKnown RBP8.93□□□□□ -0.98
LRCH3-216ENST00000481048 NBPF6Q5VWK0 638 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 C7orf43Q8WVR3 580 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 SYTL4Q96C24 671 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-216ENST00000481048 NBPF4Q96M43 638 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 SEMA6BQ9H3T3 888 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 TFCP2L1Q9NZI6 479 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 DOT1LQ8TEK3 1739 aa8.93□□□□□ -0.98
LRCH3-216ENST00000481048 TUBGCP6Q96RT7 1819 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 NSD2O96028 1365 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 FLT4P35916 1363 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 SIN3BO75182 1162 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 ZNF827Q17R98 1081 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 SH3PXD2AQ5TCZ1 1133 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 RHPN1Q8TCX5 695 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 POM121Q96HA1 1249 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 SLC30A3Q99726 388 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 MDFIQ99750 246 aa8.92□□□□□ -0.98
LRCH3-216ENST00000481048 ITGB4P16144 1822 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 TAF1LQ8IZX4 1826 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 MEGF6O75095 1541 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 PNPLA7Q6ZV29 1317 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 PCDH11XQ9BZA7 1347 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 PCDH11YQ9BZA8 1340 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 SPDYE3A6NKU9 549 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 HSP90AB2PQ58FF8 381 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 TRIM50Q86XT4 487 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 FLAD1Q8NFF5 587 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 TPCN2Q8NHX9 752 aa8.91□□□□□ -0.98
LRCH3-216ENST00000481048 CCNL1Q9UK58 526 aaPredicted RBP8.91□□□□□ -0.98
LRCH3-216ENST00000481048 GPC6Q9Y625 555 aaPredicted RBP8.91□□□□□ -0.98
LRCH3-216ENST00000481048 ADARB2-AS1A8MUL3 147 aa8.9□□□□□ -0.98
LRCH3-216ENST00000481048 M0R082 166 aa8.9□□□□□ -0.98
LRCH3-216ENST00000481048 ITGB7P26010 798 aa8.9□□□□□ -0.98
LRCH3-216ENST00000481048 PRRT3Q5FWE3 981 aa8.9□□□□□ -0.98
LRCH3-216ENST00000481048 ZNF417Q8TAU3 575 aa8.9□□□□□ -0.98
LRCH3-216ENST00000481048 SMARCC1Q92922 1105 aaPredicted RBP8.9□□□□□ -0.98
LRCH3-216ENST00000481048 ZNF587Q96SQ5 575 aaPredicted RBP8.9□□□□□ -0.98
LRCH3-216ENST00000481048 WASHC2AQ641Q2 1341 aa8.89□□□□□ -0.99
LRCH3-216ENST00000481048 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
LRCH3-216ENST00000481048 RAD21O60216 631 aa8.89□□□□□ -0.99
LRCH3-216ENST00000481048 SPEM2Q0P670 501 aa8.89□□□□□ -0.99
LRCH3-216ENST00000481048 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
LRCH3-216ENST00000481048 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
LRCH3-216ENST00000481048 HCN4Q9Y3Q4 1203 aa8.89□□□□□ -0.99
LRCH3-216ENST00000481048 ANKRD26Q9UPS8 1709 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 PLEKHG2Q9H7P9 1386 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 CYP27B1O15528 508 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 ATP1A2P50993 1020 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
LRCH3-216ENST00000481048 GPR162Q16538 588 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 RAB44Q7Z6P3 723 aaPredicted RBP8.88□□□□□ -0.99
LRCH3-216ENST00000481048 USHBP1Q8N6Y0 703 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 TNFRSF25Q93038 417 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 CEP63Q96MT8 703 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 TSPAN10Q9H1Z9 355 aaPredicted RBP8.88□□□□□ -0.99
LRCH3-216ENST00000481048 SPG7Q9UQ90 795 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 CHMP3Q9Y3E7 222 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 STARD13Q9Y3M8 1113 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 PKD1L3Q7Z443 1732 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 NCAPD2Q15021 1401 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 NSD3Q9BZ95 1437 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 C5P01031 1676 aa8.88□□□□□ -0.99
LRCH3-216ENST00000481048 POM121CA8CG34 1229 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 CLDN10P78369 228 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 COL23A1Q86Y22 540 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-216ENST00000481048 HSH2DQ96JZ2 352 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 BRD7Q9NPI1 651 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
LRCH3-216ENST00000481048 USP17L3A6NCW0 530 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 USP17L4A6NCW7 530 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 SFI1A8K8P3 1242 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 ALBP02768 609 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 ADH7P40394 386 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 KCNQ4P56696 695 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-216ENST00000481048 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 MPRIPQ6WCQ1 1025 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 USP17L1Q7RTZ2 530 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 MICALL1Q8N3F8 863 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 ADAMTS19Q8TE59 1207 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 PHACTR1Q9C0D0 580 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 POLKQ9UBT6 870 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 PALLDQ8WX93 1383 aa8.86□□□□□ -0.99
LRCH3-216ENST00000481048 UBR3Q6ZT12 1888 aa8.85□□□□□ -0.99
LRCH3-216ENST00000481048 PPM1GO15355 546 aaPredicted RBP8.85□□□□□ -0.99
LRCH3-216ENST00000481048 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms