RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
TDP2-205ENST00000480495 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
TDP2-205ENST00000480495 ABCF2Q9UG63 623 aa18.5■□□□□ 0.55
TDP2-205ENST00000480495 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 CAPN15O75808 1086 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 TNNI3KQ59H18 835 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 FAM151AQ8WW52 585 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 FAM163AQ96GL9 167 aaPredicted RBP18.49■□□□□ 0.55
TDP2-205ENST00000480495 USP40Q9NVE5 1235 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 FPGT-TNNI3KV9GXZ4 949 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 GAKO14976 1311 aa18.49■□□□□ 0.55
TDP2-205ENST00000480495 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
TDP2-205ENST00000480495 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
TDP2-205ENST00000480495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.48■□□□□ 0.55
TDP2-205ENST00000480495 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.48■□□□□ 0.55
TDP2-205ENST00000480495 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
TDP2-205ENST00000480495 ALDH1A1P00352 501 aa18.47■□□□□ 0.55
TDP2-205ENST00000480495 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
TDP2-205ENST00000480495 DCAF15Q66K64 600 aa18.47■□□□□ 0.55
TDP2-205ENST00000480495 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
TDP2-205ENST00000480495 CFHR5Q9BXR6 569 aa18.47■□□□□ 0.55
TDP2-205ENST00000480495 CHMP4BQ9H444 224 aaKnown RBP18.47■□□□□ 0.55
TDP2-205ENST00000480495 CSADQ9Y600 493 aa18.47■□□□□ 0.55
TDP2-205ENST00000480495 NOM1Q5C9Z4 860 aaKnown RBP18.46■□□□□ 0.55
TDP2-205ENST00000480495 ABHD8Q96I13 439 aa18.46■□□□□ 0.55
TDP2-205ENST00000480495 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
TDP2-205ENST00000480495 GJA5P36382 358 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 MCAMP43121 646 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 GSTO1P78417 241 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 MECOMQ03112 1051 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 NFIAQ12857 509 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 VGLL4Q14135 290 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 TTC39AQ5SRH9 613 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 PI16Q6UXB8 463 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 ERC1Q8IUD2 1116 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 OPTNQ96CV9 577 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 DBNDD2Q9BQY9 259 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 IDI2Q9BXS1 227 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 FAM198AQ9UFP1 575 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 COG6Q9Y2V7 657 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 MROH7-TTC4A0A0A0MT08 1334 aa18.45■□□□□ 0.54
TDP2-205ENST00000480495 TBC1D8O95759 1140 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 LDHCP07864 332 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 TCP10Q12799 353 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 DGKZQ13574 1117 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 OTUD7BQ6GQQ9 843 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
TDP2-205ENST00000480495 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.44■□□□□ 0.54
TDP2-205ENST00000480495 ZNF512BQ96KM6 892 aaPredicted RBP18.44■□□□□ 0.54
TDP2-205ENST00000480495 WRNIP1Q96S55 665 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 ZNF341Q9BYN7 854 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 MCOLN1Q9GZU1 580 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 CASP8AP2Q9UKL3 1982 aa18.44■□□□□ 0.54
TDP2-205ENST00000480495 GPR75-ASB3A0A0A6YYF3 556 aa18.43■□□□□ 0.54
TDP2-205ENST00000480495 TESPA1A2RU30 521 aaPredicted RBP18.43■□□□□ 0.54
TDP2-205ENST00000480495 ENTPD3O75355 529 aa18.43■□□□□ 0.54
TDP2-205ENST00000480495 MAP4K4O95819 1239 aaPredicted RBP18.43■□□□□ 0.54
TDP2-205ENST00000480495 BTDP43251 543 aa18.43■□□□□ 0.54
TDP2-205ENST00000480495 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
TDP2-205ENST00000480495 RAI14Q9P0K7 980 aa18.43■□□□□ 0.54
TDP2-205ENST00000480495 IGSF3O75054 1194 aa18.42■□□□□ 0.54
TDP2-205ENST00000480495 HMMRO75330 724 aa18.42■□□□□ 0.54
TDP2-205ENST00000480495 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
TDP2-205ENST00000480495 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
TDP2-205ENST00000480495 NSUN4Q96CB9 384 aaKnown RBP18.42■□□□□ 0.54
TDP2-205ENST00000480495 LRP2BPQ9P2M1 347 aa18.42■□□□□ 0.54
TDP2-205ENST00000480495 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
TDP2-205ENST00000480495 MYH2Q9UKX2 1941 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 OTOFQ9HC10 1997 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 SPDYE5A6NIY4 337 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 GPR25O00155 361 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 IGF2BP3O00425 579 aaKnown RBP eCLIP18.41■□□□□ 0.54
TDP2-205ENST00000480495 RGS3P49796 1198 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 GTF2A2P52657 109 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 MIGA2Q7L4E1 593 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 CTU1Q7Z7A3 348 aaKnown RBP18.41■□□□□ 0.54
TDP2-205ENST00000480495 ERO1BQ86YB8 467 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 EAF2Q96CJ1 260 aaPredicted RBP18.41■□□□□ 0.54
TDP2-205ENST00000480495 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 DBNLQ9UJU6 430 aaKnown RBP18.41■□□□□ 0.54
TDP2-205ENST00000480495 EXOC6BQ9Y2D4 811 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 SNCAIPQ9Y6H5 919 aa18.41■□□□□ 0.54
TDP2-205ENST00000480495 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
TDP2-205ENST00000480495 WDHD1O75717 1129 aaPredicted RBP18.4■□□□□ 0.54
TDP2-205ENST00000480495 ZFPM1Q8IX07 1006 aa18.4■□□□□ 0.54
TDP2-205ENST00000480495 ZNF296Q8WUU4 475 aaPredicted RBP18.4■□□□□ 0.54
TDP2-205ENST00000480495 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
TDP2-205ENST00000480495 ZKSCAN4Q969J2 545 aaPredicted RBP18.4■□□□□ 0.54
TDP2-205ENST00000480495 OTUD5Q96G74 571 aa18.4■□□□□ 0.54
TDP2-205ENST00000480495 MS4A4AQ96JQ5 239 aa18.4■□□□□ 0.54
TDP2-205ENST00000480495 CCDC8Q9H0W5 538 aaPredicted RBP18.4■□□□□ 0.54
TDP2-205ENST00000480495 SNRKQ9NRH2 765 aa18.4■□□□□ 0.54
TDP2-205ENST00000480495 LAMB1P07942 1786 aa18.4■□□□□ 0.54
TDP2-205ENST00000480495 RHBDL3P58872 404 aa18.39■□□□□ 0.53
TDP2-205ENST00000480495 FKTNO75072 461 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms