RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 RASGRF1Q13972 1273 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 TAF1CQ15572 869 aaPredicted RBP8.3□□□□□ -1.08
FN1-220ENST00000480024 FKBP1CQ5VVH2 108 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 DCAF15Q66K64 600 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 CDC42EP5Q6NZY7 148 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 FRAT1Q92837 279 aaPredicted RBP8.3□□□□□ -1.08
FN1-220ENST00000480024 HOOK2Q96ED9 719 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 ERO1AQ96HE7 468 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 MS4A4AQ96JQ5 239 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 TNNQ9UQP3 1299 aa8.3□□□□□ -1.08
FN1-220ENST00000480024 SEMA3EO15041 775 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 SRGAP3O43295 1099 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 GNAI3P08754 354 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 TRIM27P14373 513 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 SP3Q02447 781 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 CCDC102BQ68D86 513 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 INTS3Q68E01 1043 aaKnown RBP8.29□□□□□ -1.08
FN1-220ENST00000480024 MIGA2Q7L4E1 593 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 FAM43AQ8N2R8 423 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 FAM151AQ8WW52 585 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 MRIQ9BWK5 157 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 ZNF341Q9BYN7 854 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 DENND2AQ9ULE3 1009 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 RBBP6Q7Z6E9 1792 aaKnown RBP8.29□□□□□ -1.08
FN1-220ENST00000480024 CENPFP49454 3210 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
FN1-220ENST00000480024 RFX7Q2KHR2 1363 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 A0A1B0GUL7 405 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 IRF6O14896 467 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 BCAR3O75815 825 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 CETPP11597 493 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 INPP5BP32019 993 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 TIMM10P62072 90 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 CAP1Q01518 475 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 TFCP2Q12800 502 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 SNAPC2Q13487 334 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 ERO1BQ86YB8 467 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
FN1-220ENST00000480024 ARHGAP45Q92619 1136 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 EFCC1Q9HA90 598 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 ZFYVE28Q9HCC9 887 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 USP40Q9NVE5 1235 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 DOCK1Q14185 1865 aa8.28□□□□□ -1.08
FN1-220ENST00000480024 BTBD19C9JJ37 291 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 IPO8O15397 1037 aaKnown RBP8.27□□□□□ -1.09
FN1-220ENST00000480024 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
FN1-220ENST00000480024 PPIL2Q13356 520 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 MTX1Q13505 466 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 PI16Q6UXB8 463 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 ATF7IPQ6VMQ6 1270 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 ZFPM1Q8IX07 1006 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 ZGPATQ8N5A5 531 aaKnown RBP8.27□□□□□ -1.09
FN1-220ENST00000480024 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.27□□□□□ -1.09
FN1-220ENST00000480024 XAGE2Q96GT9 111 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 PTPN22Q9Y2R2 807 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.27□□□□□ -1.09
FN1-220ENST00000480024 CEP290O15078 2479 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 MAST2Q6P0Q8 1798 aa8.27□□□□□ -1.09
FN1-220ENST00000480024 PDS5AQ29RF7 1337 aaKnown RBP8.27□□□□□ -1.09
FN1-220ENST00000480024 ATRNL1Q5VV63 1379 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 PNMA6EA0A0J9YXQ4 647 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 WDHD1O75717 1129 aaPredicted RBP8.26□□□□□ -1.09
FN1-220ENST00000480024 GNAI2P04899 355 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 BTDP43251 543 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 RGS3P49796 1198 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 HNRNPUQ00839 825 aaKnown RBP eCLIP8.26□□□□□ -1.09
FN1-220ENST00000480024 PICALMQ13492 652 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 MVPQ14764 893 aaKnown RBP8.26□□□□□ -1.09
FN1-220ENST00000480024 ZSCAN29Q8IWY8 852 aaPredicted RBP8.26□□□□□ -1.09
FN1-220ENST00000480024 TMEM57Q8N5G2 664 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 NEUROD6Q96NK8 337 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 ARHGAP39Q9C0H5 1083 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 AKAP2Q9Y2D5 859 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 PTCH2Q9Y6C5 1203 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 PTPRFP10586 1907 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 MROH7-TTC4A0A0A0MT08 1334 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 GAKO14976 1311 aa8.26□□□□□ -1.09
FN1-220ENST00000480024 ATAD5Q96QE3 1844 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 TLR2O60603 784 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 MECOMQ03112 1051 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 PPATQ06203 517 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 NOL9Q5SY16 702 aaKnown RBP8.25□□□□□ -1.09
FN1-220ENST00000480024 GORABQ5T7V8 394 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
FN1-220ENST00000480024 ZKSCAN2Q63HK3 967 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 SPTY2D1Q68D10 685 aaPredicted RBP8.25□□□□□ -1.09
FN1-220ENST00000480024 ZCCHC17Q9NP64 241 aaKnown RBP8.25□□□□□ -1.09
FN1-220ENST00000480024 DDX4Q9NQI0 724 aaKnown RBP8.25□□□□□ -1.09
FN1-220ENST00000480024 ZNF112Q9UJU3 913 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 KCNH4Q9UQ05 1017 aa8.25□□□□□ -1.09
FN1-220ENST00000480024 PHIPQ8WWQ0 1821 aa8.24□□□□□ -1.09
FN1-220ENST00000480024 MKI67P46013 3256 aaKnown RBP8.24□□□□□ -1.09
FN1-220ENST00000480024 MYO5AQ9Y4I1 1855 aaKnown RBP8.24□□□□□ -1.09
FN1-220ENST00000480024 PDHXO00330 501 aa8.24□□□□□ -1.09
FN1-220ENST00000480024 ZBTB22O15209 634 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms