RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PTCH2Q9Y6C5 1203 aa10.26□□□□□ -0.77
GAPVD1-217ENST00000479511 KDM2BQ8NHM5 1336 aa10.26□□□□□ -0.77
GAPVD1-217ENST00000479511 A0A1W2PQH9 124 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 GRIN3BO60391 1043 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 DDAH1O94760 285 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 BPNT1O95861 308 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 B3GALT4O96024 378 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 ARNTP27540 789 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 DBN1Q16643 649 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 VN1R5Q7Z5H4 357 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 BSNDQ8WZ55 320 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 ZMYM5Q9UJ78 669 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 SUGT1Q9Y2Z0 365 aa10.25□□□□□ -0.77
GAPVD1-217ENST00000479511 HCLS1P14317 486 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 CDK8P49336 464 aa10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 LRRC14Q15048 493 aa10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 MRM1Q6IN84 353 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 C6orf15Q6UXA7 325 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 TMX1Q9H3N1 280 aa10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 CBX8Q9HC52 389 aa10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 SLC52A1Q9NWF4 448 aa10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 G3BP2Q9UN86 482 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 ARID4BQ4LE39 1312 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-217ENST00000479511 ATE1O95260 518 aa10.23□□□□□ -0.77
GAPVD1-217ENST00000479511 RPL6Q02878 288 aaKnown RBP10.23□□□□□ -0.77
GAPVD1-217ENST00000479511 ZNF252P-AS1Q0IIN9 211 aa10.23□□□□□ -0.77
GAPVD1-217ENST00000479511 CEP135Q66GS9 1140 aa10.23□□□□□ -0.77
GAPVD1-217ENST00000479511 IGFLR1Q9H665 355 aa10.23□□□□□ -0.77
GAPVD1-217ENST00000479511 SOX13Q9UN79 622 aa10.23□□□□□ -0.77
GAPVD1-217ENST00000479511 UPK3BL1B0FP48 263 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 UPK3BL2E5RIL1 263 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 LCE2BO14633 110 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 ASMTLO95671 621 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 VIL1P09327 827 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 SELPP16109 830 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 DALRD3Q5D0E6 543 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 TTC6Q86TZ1 520 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 FAM178BQ8IXR5 827 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 C19orf47Q8N9M1 422 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 DNAJB12Q9NXW2 375 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 CD2APQ9Y5K6 639 aa10.22□□□□□ -0.77
GAPVD1-217ENST00000479511 SOBPA7XYQ1 873 aa10.21□□□□□ -0.77
GAPVD1-217ENST00000479511 AVPP01185 164 aa10.21□□□□□ -0.77
GAPVD1-217ENST00000479511 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.77
GAPVD1-217ENST00000479511 C21orf62-AS1Q17RA5 79 aa10.21□□□□□ -0.77
GAPVD1-217ENST00000479511 CCDC181Q5TID7 509 aa10.21□□□□□ -0.77
GAPVD1-217ENST00000479511 PDZD3Q86UT5 571 aa10.21□□□□□ -0.77
GAPVD1-217ENST00000479511 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
GAPVD1-217ENST00000479511 GHRHP01286 108 aa10.2□□□□□ -0.78
GAPVD1-217ENST00000479511 PDGFRBP09619 1106 aa10.2□□□□□ -0.78
GAPVD1-217ENST00000479511 TCEA2Q15560 299 aa10.2□□□□□ -0.78
GAPVD1-217ENST00000479511 EIF4G1Q04637 1599 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 MAN1A2O60476 641 aa10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 SMNDC1O75940 238 aaKnown RBP eCLIP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 S100BP04271 92 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 ESRRAP11474 423 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 EIF2AK2P19525 551 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 PTSQ03393 145 aa10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 ST13P5Q8NFI4 369 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 EMILIN2Q9BXX0 1053 aa10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 FAM126AQ9BYI3 521 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-217ENST00000479511 FAM187AA6NFU0 413 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 H7C1W4 665 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 FAM153BP0C7A2 387 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 TBC1D8BQ0IIM8 1120 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 KRT26Q7Z3Y9 468 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 CERS3Q8IU89 383 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 IER2Q9BTL4 223 aa10.18□□□□□ -0.78
GAPVD1-217ENST00000479511 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 MEIS3P2A8K0S8 358 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 GUCY2CP25092 1073 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 CTBSQ01459 385 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 FAM182BQ5T319 152 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 JAMLQ86YT9 394 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 ADAM19Q9H013 955 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 SH2B1Q9NRF2 756 aaPredicted RBP10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 TYW1Q9NV66 732 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 ATXN7L1Q9ULK2 861 aaPredicted RBP10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 FAN1Q9Y2M0 1017 aa10.17□□□□□ -0.78
GAPVD1-217ENST00000479511 CPB1P15086 417 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 PTPRAP18433 802 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 POU3F3P20264 500 aaPredicted RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 FGFR3P22607 806 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 EVA1CP58658 441 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 ZYXQ15942 572 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 TAF7LQ5H9L4 462 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 MAP1SQ66K74 1059 aaPredicted RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 ZSCAN1Q8NBB4 408 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 GTPBP3Q969Y2 492 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 ZNF837Q96EG3 531 aaPredicted RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 TM9SF2Q99805 663 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 UBE2OQ9C0C9 1292 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 LACRTQ9GZZ8 138 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 CACNA2D2Q9NY47 1150 aa10.16□□□□□ -0.78
GAPVD1-217ENST00000479511 TRIM33Q9UPN9 1127 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms