RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 ISCA1Q9BUE6 129 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 PRDM11Q9NQV5 511 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 FAM217BQ9NTX9 383 aaPredicted RBP7.5□□□□□ -1.21
SCAF8-206ENST00000479234 AK9Q5TCS8 1911 aa7.5□□□□□ -1.21
SCAF8-206ENST00000479234 EYA2O00167 538 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 EVA1CP58658 441 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
SCAF8-206ENST00000479234 LARP1BQ659C4 914 aaKnown RBP7.49□□□□□ -1.21
SCAF8-206ENST00000479234 TTLL7Q6ZT98 887 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 ATG9AQ7Z3C6 839 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 RETREG3Q86VR2 466 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 JARID2Q92833 1246 aaPredicted RBP7.49□□□□□ -1.21
SCAF8-206ENST00000479234 CHAMP1Q96JM3 812 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 NEK1Q96PY6 1258 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 DBNDD2Q9BQY9 259 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 DSCC1Q9BVC3 393 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 SLAIN2Q9P270 581 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 TPCN1Q9ULQ1 816 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 CNPY2Q9Y2B0 182 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 SH3TC1Q8TE82 1336 aa7.49□□□□□ -1.21
SCAF8-206ENST00000479234 C5P01031 1676 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 A1BGP04217 495 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 MSNP26038 577 aaKnown RBP7.48□□□□□ -1.21
SCAF8-206ENST00000479234 ST3GAL1Q11201 340 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 TCIRG1Q13488 830 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 TOB2Q14106 344 aaPredicted RBP7.48□□□□□ -1.21
SCAF8-206ENST00000479234 ZNF589Q86UQ0 364 aaPredicted RBP7.48□□□□□ -1.21
SCAF8-206ENST00000479234 LLPHQ9BRT6 129 aaKnown RBP7.48□□□□□ -1.21
SCAF8-206ENST00000479234 PLA2G12BQ9BX93 195 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 NOL7Q9UMY1 257 aaKnown RBP7.48□□□□□ -1.21
SCAF8-206ENST00000479234 AKAP2Q9Y2D5 859 aa7.48□□□□□ -1.21
SCAF8-206ENST00000479234 PALLDQ8WX93 1383 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 PARP4Q9UKK3 1724 aaKnown RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 TNS2Q63HR2 1409 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 STRCP1A6NGW2 1772 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 ZNF500O60304 480 aaPredicted RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 CSF1RP07333 972 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 IFIT1P09914 478 aaKnown RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 PIP4K2AP48426 406 aaPredicted RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 TERF1P54274 439 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 KRT85P78386 507 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 NECAB1Q8N987 351 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 EDC3Q96F86 508 aaKnown RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 NEUROD6Q96NK8 337 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 DNAJC2Q99543 621 aaKnown RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 FAM117AQ9C073 453 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 SCAND2PQ9GZW5 306 aaPredicted RBP7.47□□□□□ -1.21
SCAF8-206ENST00000479234 CEP126Q9P2H0 1117 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 ELP1O95163 1332 aa7.47□□□□□ -1.21
SCAF8-206ENST00000479234 VPS37CA5D8V6 355 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 RNF113AO15541 343 aaKnown RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 OFD1O75665 1012 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 STARD3NLO95772 234 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 ZFYP08048 801 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 VEGFBP49765 207 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 TIMM10P62072 90 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 EXOSC10Q01780 885 aaKnown RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 DNM1Q05193 864 aaKnown RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 CCDC57Q2TAC2 916 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 FOXD4L6Q3SYB3 417 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 HSP90AB3PQ58FF7 597 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 CCDC158Q5M9N0 1113 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 FOXD4L3Q6VB84 417 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 FBXL16Q8N461 479 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 GTF3C6Q969F1 213 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 AGXT2Q9BYV1 514 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 ZSCAN16Q9H4T2 348 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 PAG1Q9NWQ8 432 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 TMOD3Q9NYL9 352 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 CTNNA3Q9UI47 895 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 KIF3AQ9Y496 699 aa7.46□□□□□ -1.22
SCAF8-206ENST00000479234 COL5A2P05997 1499 aaPredicted RBP7.46□□□□□ -1.22
SCAF8-206ENST00000479234 ZNF609O15014 1411 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 A0A1B0GUL7 405 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 FIBPO43427 364 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 PFKFB2O60825 505 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 CYP21A2P08686 494 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 CCNYL3P0C7X3 344 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 HSPA2P54652 639 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 SH3BP2P78314 561 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 HMGN5P82970 282 aaKnown RBP7.45□□□□□ -1.22
SCAF8-206ENST00000479234 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 LRRC24Q50LG9 513 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 ATL3Q6DD88 541 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.45□□□□□ -1.22
SCAF8-206ENST00000479234 KIF6Q6ZMV9 814 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 Q6ZUG5 572 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 DDX46Q7L014 1031 aaKnown RBP7.45□□□□□ -1.22
SCAF8-206ENST00000479234 MPNDQ8N594 471 aa7.45□□□□□ -1.22
SCAF8-206ENST00000479234 ZBTB38Q8NAP3 1195 aaPredicted RBP7.45□□□□□ -1.22
SCAF8-206ENST00000479234 SMARCC2Q8TAQ2 1214 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms