RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 ZNF532Q9HCE3 1301 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 TBC1D10CQ8IV04 446 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 SEC31BQ9NQW1 1179 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 PARP4Q9UKK3 1724 aaKnown RBP16.3■□□□□ 0.2
CCDC78-210ENST00000478979 IRX3P78415 501 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-210ENST00000478979 TRDNQ13061 729 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 ZKSCAN3Q9BRR0 538 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 KCND1Q9NSA2 647 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
CCDC78-210ENST00000478979 ZRANB2O95218 330 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 TNNT3P45378 269 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 ST5P78524 1137 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 STX1AQ16623 288 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 TMCO3Q6UWJ1 677 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 KRBA2Q6ZNG9 492 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 CYB5R4Q7L1T6 521 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 TXLNBQ8N3L3 684 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 ZNF274Q96GC6 653 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
CCDC78-210ENST00000478979 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
CCDC78-210ENST00000478979 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 TPM4P67936 248 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
CCDC78-210ENST00000478979 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.26e-8■■■■■ 46.2
CCDC78-210ENST00000478979 HPS5Q9UPZ3 1129 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 UBN2Q6ZU65 1347 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 CSF1RP07333 972 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 CYP19A1P11511 503 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-210ENST00000478979 KCNQ4P56696 695 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 LRRFIP1Q32MZ4 808 aaKnown RBP16.28■□□□□ 0.2
CCDC78-210ENST00000478979 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
CCDC78-210ENST00000478979 RCOR1Q9UKL0 485 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
CCDC78-210ENST00000478979 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
CCDC78-210ENST00000478979 NDUFA8P51970 172 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 MUM1L1Q5H9M0 696 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 CMTR1Q8N1G2 835 aaKnown RBP16.27■□□□□ 0.2
CCDC78-210ENST00000478979 SMARCE1Q969G3 411 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 AIDAQ96BJ3 306 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 DHX40Q8IX18 779 aaKnown RBP16.27■□□□□ 0.2
CCDC78-210ENST00000478979 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 MAGEB6Q8N7X4 407 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 AGXT2Q9BYV1 514 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
CCDC78-210ENST00000478979 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
CCDC78-210ENST00000478979 SALL1Q9NSC2 1324 aa16.27■□□□□ 0.19
CCDC78-210ENST00000478979 EXOC5O00471 708 aa16.27■□□□□ 0.19
CCDC78-210ENST00000478979 ZFYP08048 801 aaPredicted RBP16.27■□□□□ 0.19
CCDC78-210ENST00000478979 ZBTB9Q96C00 473 aa16.27■□□□□ 0.19
CCDC78-210ENST00000478979 RASSF4Q9H2L5 321 aa16.27■□□□□ 0.19
CCDC78-210ENST00000478979 ARMT1Q9H993 441 aa16.27■□□□□ 0.19
CCDC78-210ENST00000478979 XIRP1Q702N8 1843 aaKnown RBP16.27■□□□□ 0.19
CCDC78-210ENST00000478979 SEC31AO94979 1220 aaKnown RBP16.26■□□□□ 0.19
CCDC78-210ENST00000478979 GSDMDP57764 484 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
CCDC78-210ENST00000478979 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 WTIPA6NIX2 430 aaPredicted RBP16.26■□□□□ 0.19
CCDC78-210ENST00000478979 PRKAB2O43741 272 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 PDE8BO95263 885 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 PDE6AP16499 860 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 ADD2P35612 726 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 UBXN4Q92575 508 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
CCDC78-210ENST00000478979 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
CCDC78-210ENST00000478979 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC78-210ENST00000478979 NBPF11Q86T75 865 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-210ENST00000478979 NEDD4P46934 1319 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 UBR2Q8IWV8 1755 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 MBD4O95243 580 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 FAM160A1Q05DH4 1040 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
CCDC78-210ENST00000478979 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
CCDC78-210ENST00000478979 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
CCDC78-210ENST00000478979 TRIM66O15016 1216 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 ATP2B1P20020 1258 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
CCDC78-210ENST00000478979 C10orf67Q8IYJ2 551 aa16.25■□□□□ 0.19
CCDC78-210ENST00000478979 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 CDC27P30260 824 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 BCAMP50895 628 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
CCDC78-210ENST00000478979 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
CCDC78-210ENST00000478979 LCMT1Q9UIC8 334 aa16.24■□□□□ 0.19
CCDC78-210ENST00000478979 ZSCAN26Q16670 478 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms