RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ZNF157P51786 506 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-207ENST00000478913 FAAP100Q0VG06 881 aa8.3□□□□□ -1.08
CCDC171-207ENST00000478913 MEI1Q5TIA1 1274 aa8.3□□□□□ -1.08
CCDC171-207ENST00000478913 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
CCDC171-207ENST00000478913 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-207ENST00000478913 RIMS1Q86UR5 1692 aaKnown RBP8.3□□□□□ -1.08
CCDC171-207ENST00000478913 FURINP09958 794 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 SPATA31C1P0DKV0 1188 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 ELNP15502 786 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 GSTM4Q03013 218 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 PPP2R3AQ06190 1150 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 TSNAXIP1Q2TAA8 658 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 HGSNATQ68CP4 663 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 GALNT11Q8NCW6 608 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 ANKRD24Q8TF21 1146 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 KIAA1522Q9P206 1035 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-207ENST00000478913 POLA1P09884 1462 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-207ENST00000478913 GLI2P10070 1586 aa8.29□□□□□ -1.08
CCDC171-207ENST00000478913 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
CCDC171-207ENST00000478913 EIF4EBP3O60516 100 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-207ENST00000478913 ITGB7P26010 798 aa8.28□□□□□ -1.08
CCDC171-207ENST00000478913 COL8A1P27658 744 aa8.28□□□□□ -1.08
CCDC171-207ENST00000478913 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-207ENST00000478913 TAF1CQ15572 869 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-207ENST00000478913 ALYREFQ86V81 257 aaKnown RBP8.28□□□□□ -1.08
CCDC171-207ENST00000478913 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
CCDC171-207ENST00000478913 PLB1Q6P1J6 1458 aa8.27□□□□□ -1.09
CCDC171-207ENST00000478913 KRBA1A5PL33 1030 aa8.27□□□□□ -1.09
CCDC171-207ENST00000478913 DLL1O00548 723 aa8.27□□□□□ -1.09
CCDC171-207ENST00000478913 CEBPAP49715 358 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-207ENST00000478913 ST13P50502 369 aaKnown RBP8.27□□□□□ -1.09
CCDC171-207ENST00000478913 CCDC85BQ15834 202 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-207ENST00000478913 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-207ENST00000478913 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-207ENST00000478913 TMEM87AQ8NBN3 555 aa8.27□□□□□ -1.09
CCDC171-207ENST00000478913 NECAB3Q96P71 396 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-207ENST00000478913 BACH2Q9BYV9 841 aa8.27□□□□□ -1.09
CCDC171-207ENST00000478913 USP31Q70CQ4 1352 aa8.26□□□□□ -1.09
CCDC171-207ENST00000478913 RECKO95980 971 aa8.26□□□□□ -1.09
CCDC171-207ENST00000478913 NLRP12P59046 1061 aa8.26□□□□□ -1.09
CCDC171-207ENST00000478913 MLECQ14165 292 aa8.26□□□□□ -1.09
CCDC171-207ENST00000478913 GRIK4Q16099 956 aa8.26□□□□□ -1.09
CCDC171-207ENST00000478913 ENC1O14682 589 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 CELA3AP09093 270 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 C1QTNF8P60827 252 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 AP3B2Q13367 1082 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 IGF2-ASQ6U949 168 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 SV2BQ7L1I2 683 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 NACC1Q96RE7 527 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 BCORL1Q5H9F3 1711 aa8.25□□□□□ -1.09
CCDC171-207ENST00000478913 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 E9PSI1 815 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 TM4SF5O14894 197 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
CCDC171-207ENST00000478913 ADAM11O75078 769 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 APBA3O96018 575 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 CYP11A1P05108 521 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 TRIM56Q9BRZ2 755 aaKnown RBP8.24□□□□□ -1.09
CCDC171-207ENST00000478913 KCNK4Q9NYG8 393 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 SAMM50Q9Y512 469 aa8.24□□□□□ -1.09
CCDC171-207ENST00000478913 SHROOM2Q13796 1616 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 NME2P22392 152 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 POU4F3Q15319 338 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 SHISA2Q6UWI4 295 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 SULF2Q8IWU5 870 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 UBASH3BQ8TF42 649 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 CORO1BQ9BR76 489 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 NOC4LQ9BVI4 516 aaKnown RBP8.23□□□□□ -1.09
CCDC171-207ENST00000478913 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
CCDC171-207ENST00000478913 USP21Q9UK80 565 aa8.23□□□□□ -1.09
CCDC171-207ENST00000478913 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
CCDC171-207ENST00000478913 NUP160Q12769 1436 aa8.22□□□□□ -1.09
CCDC171-207ENST00000478913 PAGE1O75459 146 aa8.22□□□□□ -1.09
CCDC171-207ENST00000478913 MAOBP27338 520 aa8.22□□□□□ -1.09
CCDC171-207ENST00000478913 LDLRAD1Q5T700 205 aa8.22□□□□□ -1.09
CCDC171-207ENST00000478913 NRSN2Q9GZP1 204 aa8.22□□□□□ -1.09
CCDC171-207ENST00000478913 GRIN2AQ12879 1464 aa8.21□□□□□ -1.09
CCDC171-207ENST00000478913 C9orf172C9J069 976 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 SCAMP3O14828 347 aaKnown RBP8.21□□□□□ -1.1
CCDC171-207ENST00000478913 WISP1O95388 367 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 SELPP16109 830 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 MAP3K11Q16584 847 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 PCNX4Q63HM2 1172 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 ACAD11Q709F0 780 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 EMILIN2Q9BXX0 1053 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 CBX8Q9HC52 389 aa8.21□□□□□ -1.1
CCDC171-207ENST00000478913 EPRSP07814 1512 aaKnown RBP8.2□□□□□ -1.1
CCDC171-207ENST00000478913 LOC100289279A0A1B0GTE1 492 aa8.2□□□□□ -1.1
CCDC171-207ENST00000478913 GSTP1P09211 210 aaKnown RBP8.2□□□□□ -1.1
CCDC171-207ENST00000478913 RLBP1P12271 317 aa8.2□□□□□ -1.1
CCDC171-207ENST00000478913 ARNTP27540 789 aa8.2□□□□□ -1.1
CCDC171-207ENST00000478913 ZNF76P36508 570 aa8.2□□□□□ -1.1
CCDC171-207ENST00000478913 NRG1Q02297 640 aaPredicted RBP8.2□□□□□ -1.1
CCDC171-207ENST00000478913 HP1BP3Q5SSJ5 553 aaPredicted RBP8.2□□□□□ -1.1
CCDC171-207ENST00000478913 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
CCDC171-207ENST00000478913 HS2ST1Q7LGA3 356 aa8.2□□□□□ -1.1
CCDC171-207ENST00000478913 LENG1Q96BZ8 264 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms