RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
HDAC8-217ENST00000478743 KCNH4Q9UQ05 1017 aa15.87■□□□□ 0.13
HDAC8-217ENST00000478743 IGHMBP2P38935 993 aaKnown RBP15.86■□□□□ 0.13
HDAC8-217ENST00000478743 PPATQ06203 517 aa15.86■□□□□ 0.13
HDAC8-217ENST00000478743 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
HDAC8-217ENST00000478743 LRRC26Q2I0M4 334 aa15.86■□□□□ 0.13
HDAC8-217ENST00000478743 PARK7Q99497 189 aaKnown RBP15.86■□□□□ 0.13
HDAC8-217ENST00000478743 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
HDAC8-217ENST00000478743 ANKRD2Q9GZV1 360 aa15.86■□□□□ 0.13
HDAC8-217ENST00000478743 TTF2Q9UNY4 1162 aaKnown RBP15.86■□□□□ 0.13
HDAC8-217ENST00000478743 DNAH12Q6ZR08 3092 aa15.86■□□□□ 0.13
HDAC8-217ENST00000478743 ITGA6P23229 1130 aa15.85■□□□□ 0.13
HDAC8-217ENST00000478743 DUSP27Q5VZP5 1158 aa15.85■□□□□ 0.13
HDAC8-217ENST00000478743 C15orf52Q6ZUT6 534 aaKnown RBP15.85■□□□□ 0.13
HDAC8-217ENST00000478743 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
HDAC8-217ENST00000478743 TNPO2O14787 897 aaKnown RBP15.84■□□□□ 0.13
HDAC8-217ENST00000478743 HOXB7P09629 217 aa15.84■□□□□ 0.13
HDAC8-217ENST00000478743 CRKP46108 304 aa15.84■□□□□ 0.13
HDAC8-217ENST00000478743 TJAP1Q5JTD0 557 aa15.84■□□□□ 0.13
HDAC8-217ENST00000478743 MIGA2Q7L4E1 593 aa15.84■□□□□ 0.13
HDAC8-217ENST00000478743 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
HDAC8-217ENST00000478743 FOSL2P15408 326 aa15.83■□□□□ 0.12
HDAC8-217ENST00000478743 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
HDAC8-217ENST00000478743 TNNI2P48788 182 aa15.83■□□□□ 0.12
HDAC8-217ENST00000478743 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
HDAC8-217ENST00000478743 MFSD14BQ5SR56 506 aa15.83■□□□□ 0.12
HDAC8-217ENST00000478743 COL6A1P12109 1028 aa15.82■□□□□ 0.12
HDAC8-217ENST00000478743 CAPN2P17655 700 aa15.82■□□□□ 0.12
HDAC8-217ENST00000478743 ZNF804AQ7Z570 1209 aa15.82■□□□□ 0.12
HDAC8-217ENST00000478743 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
HDAC8-217ENST00000478743 C9orf50Q5SZB4 431 aa15.81■□□□□ 0.12
HDAC8-217ENST00000478743 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
HDAC8-217ENST00000478743 MAP3K2Q9Y2U5 619 aa15.81■□□□□ 0.12
HDAC8-217ENST00000478743 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
HDAC8-217ENST00000478743 MPHOSPH8Q99549 860 aa15.8■□□□□ 0.12
HDAC8-217ENST00000478743 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
HDAC8-217ENST00000478743 HMGCRP04035 888 aa15.79■□□□□ 0.12
HDAC8-217ENST00000478743 ZNF341Q9BYN7 854 aa15.79■□□□□ 0.12
HDAC8-217ENST00000478743 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
HDAC8-217ENST00000478743 DOCK2Q92608 1830 aa15.78■□□□□ 0.12
HDAC8-217ENST00000478743 SHHQ15465 462 aa15.78■□□□□ 0.12
HDAC8-217ENST00000478743 TRIB2Q92519 343 aa15.78■□□□□ 0.12
HDAC8-217ENST00000478743 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
HDAC8-217ENST00000478743 ZNF112Q9UJU3 913 aa15.78■□□□□ 0.12
HDAC8-217ENST00000478743 H7C1W4 665 aa15.77■□□□□ 0.12
HDAC8-217ENST00000478743 ELL2O00472 640 aaPredicted RBP15.77■□□□□ 0.12
HDAC8-217ENST00000478743 GYG1P46976 350 aa15.77■□□□□ 0.12
HDAC8-217ENST00000478743 CASP7P55210 303 aa15.77■□□□□ 0.12
HDAC8-217ENST00000478743 ANKRD13CQ8N6S4 541 aa15.77■□□□□ 0.12
HDAC8-217ENST00000478743 TDRD7Q8NHU6 1098 aaKnown RBP15.77■□□□□ 0.12
HDAC8-217ENST00000478743 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
HDAC8-217ENST00000478743 DOCK1Q14185 1865 aa15.76■□□□□ 0.11
HDAC8-217ENST00000478743 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
HDAC8-217ENST00000478743 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
HDAC8-217ENST00000478743 CSF1RP07333 972 aa15.76■□□□□ 0.11
HDAC8-217ENST00000478743 GADL1Q6ZQY3 521 aa15.76■□□□□ 0.11
HDAC8-217ENST00000478743 MBIPQ9NS73 344 aa15.76■□□□□ 0.11
HDAC8-217ENST00000478743 A0A0G2JLL6 359 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-217ENST00000478743 PLIN1O60240 522 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 SLURP2P0DP57 97 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 LMOD3Q0VAK6 560 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 NOL9Q5SY16 702 aaKnown RBP15.75■□□□□ 0.11
HDAC8-217ENST00000478743 DCAF15Q66K64 600 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 PRRT2Q7Z6L0 340 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-217ENST00000478743 FAM83AQ86UY5 434 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 COA7Q96BR5 231 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 IQSEC3Q9UPP2 1182 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-217ENST00000478743 LOC285556D6RIA3 1793 aa15.75■□□□□ 0.11
HDAC8-217ENST00000478743 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
HDAC8-217ENST00000478743 PI4KAP2A4QPH2 592 aa15.74■□□□□ 0.11
HDAC8-217ENST00000478743 MAP3K21Q5TCX8 1036 aa15.74■□□□□ 0.11
HDAC8-217ENST00000478743 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
HDAC8-217ENST00000478743 CCDC84Q86UT8 332 aaPredicted RBP15.74■□□□□ 0.11
HDAC8-217ENST00000478743 PI4KAP1Q8N8J0 262 aa15.74■□□□□ 0.11
HDAC8-217ENST00000478743 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
HDAC8-217ENST00000478743 BDP1A6H8Y1 2624 aa15.74■□□□□ 0.11
HDAC8-217ENST00000478743 CXCL11O14625 94 aa15.73■□□□□ 0.11
HDAC8-217ENST00000478743 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
HDAC8-217ENST00000478743 SMCR8Q8TEV9 937 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-217ENST00000478743 ZNF594Q96JF6 807 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-217ENST00000478743 CCND3P30281 292 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-217ENST00000478743 GRIN2CQ14957 1233 aa15.72■□□□□ 0.11
HDAC8-217ENST00000478743 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
HDAC8-217ENST00000478743 LHX8Q68G74 356 aa15.72■□□□□ 0.11
HDAC8-217ENST00000478743 NECAB3Q96P71 396 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-217ENST00000478743 LBHD1Q9BQE6 289 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-217ENST00000478743 TCF20Q9UGU0 1960 aaKnown RBP15.72■□□□□ 0.11
HDAC8-217ENST00000478743 ATRNL1Q5VV63 1379 aa15.72■□□□□ 0.11
HDAC8-217ENST00000478743 RLFQ13129 1914 aa15.71■□□□□ 0.11
HDAC8-217ENST00000478743 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
HDAC8-217ENST00000478743 PEX10O60683 326 aa15.71■□□□□ 0.11
HDAC8-217ENST00000478743 TCP10Q12799 353 aa15.71■□□□□ 0.11
HDAC8-217ENST00000478743 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-217ENST00000478743 KSR2Q6VAB6 950 aa15.71■□□□□ 0.11
HDAC8-217ENST00000478743 FAM84BQ96KN1 310 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-217ENST00000478743 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
HDAC8-217ENST00000478743 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms