RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
SCAMP3-206ENST00000478737 AACSQ86V21 672 aa12.2□□□□□ -0.46
SCAMP3-206ENST00000478737 SLF2Q8IX21 1173 aa12.2□□□□□ -0.46
SCAMP3-206ENST00000478737 NSUN4Q96CB9 384 aaKnown RBP12.2□□□□□ -0.46
SCAMP3-206ENST00000478737 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
SCAMP3-206ENST00000478737 UBE2Q2LH0YL09 131 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 APBB1O00213 710 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 TNNI2P48788 182 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 MAP2K1Q02750 393 aaPredicted RBP12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 IL1RAPL2Q9NP60 686 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 TRPM7Q96QT4 1865 aa12.19□□□□□ -0.46
SCAMP3-206ENST00000478737 MYH2Q9UKX2 1941 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 PPP1R12BO60237 982 aaPredicted RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 LDHCP07864 332 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 SLC10A3P09131 477 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 ZNF157P51786 506 aaPredicted RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 GSTO1P78417 241 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 TMED8Q6PL24 325 aaPredicted RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 TMEM39BQ9GZU3 492 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 TMOD2Q9NZR1 351 aa12.18□□□□□ -0.46
SCAMP3-206ENST00000478737 ZAP70P43403 619 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 CACNB3P54284 484 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 ZIC5Q96T25 663 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 LRRCC1Q9C099 1032 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 LRP2BPQ9P2M1 347 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 SSC5DA1L4H1 1573 aa12.17□□□□□ -0.46
SCAMP3-206ENST00000478737 MROH7-TTC4A0A0A0MT08 1334 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 AOC2O75106 756 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 WDHD1O75717 1129 aaPredicted RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 HSPA1AP0DMV8 641 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 HSPA1BP0DMV9 641 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 RHBDL3P58872 404 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 PPP4CP60510 307 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 NFIAQ12857 509 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 RASAL3Q86YV0 1011 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 RAI14Q9P0K7 980 aa12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 ANGEL1Q9UNK9 670 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 RPAP1Q9BWH6 1393 aaPredicted RBP12.16□□□□□ -0.46
SCAMP3-206ENST00000478737 ENTPD3O75355 529 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 ATP5JP18859 108 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 BTDP43251 543 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 KIF23Q02241 960 aaPredicted RBP12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 TTLL12Q14166 644 aaPredicted RBP12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 HOOK2Q96ED9 719 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 CSRNP1Q96S65 589 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 FZD1Q9UP38 647 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 RFX7Q2KHR2 1363 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 PAPPA2Q9BXP8 1791 aa12.15□□□□□ -0.46
SCAMP3-206ENST00000478737 CA12O43570 354 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 GRM1Q13255 1194 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 PRKG1Q13976 671 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 ZFPM1Q8IX07 1006 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 ANKRD13AQ8IZ07 590 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 SLC10A4Q96EP9 437 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 RWDD1Q9H446 243 aaPredicted RBP12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 CDK5RAP2Q96SN8 1893 aa12.14□□□□□ -0.47
SCAMP3-206ENST00000478737 FOXN1O15353 648 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 TM4SF4P48230 202 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 RGS3P49796 1198 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 SPRYD7Q5W111 196 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 NAA16Q6N069 864 aaPredicted RBP12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.471e-10■■■□□ 19.1
SCAMP3-206ENST00000478737 GCC1Q96CN9 775 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 DDX4Q9NQI0 724 aaKnown RBP12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
SCAMP3-206ENST00000478737 SMARCA5O60264 1052 aaPredicted RBP12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 BAG3O95817 575 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 ZBTB48P10074 688 aaPredicted RBP12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 PLCG2P16885 1265 aa12.12□□□□□ -0.47
SCAMP3-206ENST00000478737 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms