RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
USP11-207ENST00000478596 TTC28Q96AY4 2481 aa18.28■□□□□ 0.52
USP11-207ENST00000478596 BCRP11274 1271 aa18.27■□□□□ 0.52
USP11-207ENST00000478596 PPATQ06203 517 aa18.27■□□□□ 0.52
USP11-207ENST00000478596 CHRNDQ07001 517 aa18.27■□□□□ 0.52
USP11-207ENST00000478596 TRMT2AQ8IZ69 625 aaKnown RBP18.27■□□□□ 0.52
USP11-207ENST00000478596 ANKLE1Q8NAG6 615 aa18.27■□□□□ 0.52
USP11-207ENST00000478596 MPHOSPH8Q99549 860 aa18.27■□□□□ 0.52
USP11-207ENST00000478596 GABRQQ9UN88 632 aa18.27■□□□□ 0.52
USP11-207ENST00000478596 SPEF2Q9C093 1822 aa18.26■□□□□ 0.51
USP11-207ENST00000478596 TCP10L2B9ZVM9 353 aa18.26■□□□□ 0.51
USP11-207ENST00000478596 COL9A1P20849 921 aa18.26■□□□□ 0.51
USP11-207ENST00000478596 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
USP11-207ENST00000478596 ZNF804AQ7Z570 1209 aa18.26■□□□□ 0.51
USP11-207ENST00000478596 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
USP11-207ENST00000478596 DIS3LQ8TF46 1054 aaKnown RBP18.26■□□□□ 0.51
USP11-207ENST00000478596 ZKSCAN4Q969J2 545 aaPredicted RBP18.26■□□□□ 0.51
USP11-207ENST00000478596 WRNIP1Q96S55 665 aa18.26■□□□□ 0.51
USP11-207ENST00000478596 UBE2OQ9C0C9 1292 aaKnown RBP18.26■□□□□ 0.51
USP11-207ENST00000478596 ALPK3Q96L96 1907 aa18.25■□□□□ 0.51
USP11-207ENST00000478596 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
USP11-207ENST00000478596 ITGA6P23229 1130 aa18.25■□□□□ 0.51
USP11-207ENST00000478596 IRF5Q13568 498 aa18.25■□□□□ 0.51
USP11-207ENST00000478596 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
USP11-207ENST00000478596 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
USP11-207ENST00000478596 ARAP2Q8WZ64 1704 aa18.24■□□□□ 0.51
USP11-207ENST00000478596 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
USP11-207ENST00000478596 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
USP11-207ENST00000478596 ELNP15502 786 aa18.24■□□□□ 0.51
USP11-207ENST00000478596 SYN1P17600 705 aa18.24■□□□□ 0.51
USP11-207ENST00000478596 FLT3LGP49771 235 aa18.24■□□□□ 0.51
USP11-207ENST00000478596 PARK7Q99497 189 aaKnown RBP18.24■□□□□ 0.51
USP11-207ENST00000478596 KCNH4Q9UQ05 1017 aa18.24■□□□□ 0.51
USP11-207ENST00000478596 SNAP23O00161 211 aa18.23■□□□□ 0.51
USP11-207ENST00000478596 MOGSQ13724 837 aa18.23■□□□□ 0.51
USP11-207ENST00000478596 HOOK2Q96ED9 719 aa18.23■□□□□ 0.51
USP11-207ENST00000478596 TTF2Q9UNY4 1162 aaKnown RBP18.23■□□□□ 0.51
USP11-207ENST00000478596 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
USP11-207ENST00000478596 LAMA2P24043 3122 aaKnown RBP18.22■□□□□ 0.51
USP11-207ENST00000478596 SYMPKQ92797 1274 aaKnown RBP18.22■□□□□ 0.51
USP11-207ENST00000478596 PLA2G12BQ9BX93 195 aa18.22■□□□□ 0.51
USP11-207ENST00000478596 NBPF3Q9H094 633 aa18.22■□□□□ 0.51
USP11-207ENST00000478596 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
USP11-207ENST00000478596 VAMP4O75379 141 aa18.21■□□□□ 0.51
USP11-207ENST00000478596 MFSD14BQ5SR56 506 aa18.21■□□□□ 0.51
USP11-207ENST00000478596 MAP3K2Q9Y2U5 619 aa18.21■□□□□ 0.51
USP11-207ENST00000478596 PRUNE2Q8WUY3 3088 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 MYH3P11055 1940 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 H7C1W4 665 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 TAF5LO75529 589 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 CSF1RP07333 972 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 CRKP46108 304 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.2■□□□□ 0.58e-10■■■■□ 21.6
USP11-207ENST00000478596 RCAN3Q9UKA8 241 aa18.2■□□□□ 0.5
USP11-207ENST00000478596 DCAF15Q66K64 600 aa18.19■□□□□ 0.5
USP11-207ENST00000478596 FAM83AQ86UY5 434 aa18.19■□□□□ 0.5
USP11-207ENST00000478596 CYP2C8P10632 490 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 ALDH1L2Q3SY69 923 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 GPAT2Q6NUI2 795 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 KSR2Q6VAB6 950 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 C11orf49Q9H6J7 331 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
USP11-207ENST00000478596 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
USP11-207ENST00000478596 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 PLA2G5P39877 138 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 FKBP1CQ5VVH2 108 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 TDRD7Q8NHU6 1098 aaKnown RBP18.17■□□□□ 0.5
USP11-207ENST00000478596 MAFAQ8NHW3 353 aaPredicted RBP18.17■□□□□ 0.5
USP11-207ENST00000478596 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 FAM161BQ96MY7 647 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 ZNF341Q9BYN7 854 aa18.17■□□□□ 0.5
USP11-207ENST00000478596 RPAP1Q9BWH6 1393 aaPredicted RBP18.17■□□□□ 0.5
USP11-207ENST00000478596 INPP5BP32019 993 aa18.16■□□□□ 0.5
USP11-207ENST00000478596 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
USP11-207ENST00000478596 HDLBPQ00341 1268 aaKnown RBP18.16■□□□□ 0.5
USP11-207ENST00000478596 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
USP11-207ENST00000478596 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
USP11-207ENST00000478596 ZNF697Q5TEC3 545 aa18.16■□□□□ 0.5
USP11-207ENST00000478596 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
USP11-207ENST00000478596 CDX2Q99626 313 aaPredicted RBP18.16■□□□□ 0.5
USP11-207ENST00000478596 PI4KAP2A4QPH2 592 aa18.15■□□□□ 0.5
USP11-207ENST00000478596 CACNB3P54284 484 aa18.15■□□□□ 0.5
USP11-207ENST00000478596 PI4KAP1Q8N8J0 262 aa18.15■□□□□ 0.5
USP11-207ENST00000478596 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
USP11-207ENST00000478596 MGAMO43451 1857 aa18.15■□□□□ 0.5
USP11-207ENST00000478596 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
USP11-207ENST00000478596 CXCL11O14625 94 aa18.14■□□□□ 0.49
USP11-207ENST00000478596 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
USP11-207ENST00000478596 OGDHLQ9ULD0 1010 aa18.14■□□□□ 0.49
USP11-207ENST00000478596 CDH23Q9H251 3354 aa18.13■□□□□ 0.49
USP11-207ENST00000478596 CASP7P55210 303 aa18.13■□□□□ 0.49
USP11-207ENST00000478596 FLIIQ13045 1269 aa18.13■□□□□ 0.49
USP11-207ENST00000478596 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
USP11-207ENST00000478596 MIGA2Q7L4E1 593 aa18.13■□□□□ 0.49
USP11-207ENST00000478596 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
USP11-207ENST00000478596 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
USP11-207ENST00000478596 TNFRSF10AO00220 468 aa18.12■□□□□ 0.49
USP11-207ENST00000478596 BCAR3O75815 825 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms