RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CCL15Q16663 113 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 SPTY2D1Q68D10 685 aaPredicted RBP17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 ZNF341Q9BYN7 854 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 ZCCHC17Q9NP64 241 aaKnown RBP17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 TRIM17Q9Y577 477 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 PDS5AQ29RF7 1337 aaKnown RBP17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 SNAPC2Q13487 334 aa17.89■□□□□ 0.45
SMARCE1-209ENST00000478349 MTX1Q13505 466 aa17.89■□□□□ 0.45
SMARCE1-209ENST00000478349 TAF1CQ15572 869 aaPredicted RBP17.89■□□□□ 0.45
SMARCE1-209ENST00000478349 DZIP1Q86YF9 867 aaKnown RBP17.89■□□□□ 0.45
SMARCE1-209ENST00000478349 DAGLAQ9Y4D2 1042 aa17.89■□□□□ 0.45
SMARCE1-209ENST00000478349 PRDX5P30044 214 aa17.88■□□□□ 0.45
SMARCE1-209ENST00000478349 SP3Q02447 781 aa17.88■□□□□ 0.45
SMARCE1-209ENST00000478349 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
SMARCE1-209ENST00000478349 CDAN1Q8IWY9 1227 aa17.88■□□□□ 0.45
SMARCE1-209ENST00000478349 R3HDMLQ9H3Y0 253 aa17.88■□□□□ 0.45
SMARCE1-209ENST00000478349 GNAI2P04899 355 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 PHKA1P46020 1223 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 PPIL2Q13356 520 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 CCDC102BQ68D86 513 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 OTOP1Q7RTM1 612 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 MS4A4AQ96JQ5 239 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 EFCC1Q9HA90 598 aa17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 PA2G4Q9UQ80 394 aaKnown RBP17.87■□□□□ 0.45
SMARCE1-209ENST00000478349 PPATQ06203 517 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 KIF22Q14807 665 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 DIXDC1Q155Q3 683 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 GORABQ5T7V8 394 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 CDC42EP5Q6NZY7 148 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 BRI3BPQ8WY22 251 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 PTPN18Q99952 460 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 SNCAIPQ9Y6H5 919 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 LAMB1P07942 1786 aa17.86■□□□□ 0.45
SMARCE1-209ENST00000478349 A0A1B0GUL7 405 aa17.85■□□□□ 0.45
SMARCE1-209ENST00000478349 TRIM27P14373 513 aa17.85■□□□□ 0.45
SMARCE1-209ENST00000478349 CD99L2Q8TCZ2 262 aa17.85■□□□□ 0.45
SMARCE1-209ENST00000478349 USP40Q9NVE5 1235 aa17.85■□□□□ 0.45
SMARCE1-209ENST00000478349 ENTPD3O75355 529 aa17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 TCP10Q12799 353 aa17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 G3BP1Q13283 466 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 RASGRF1Q13972 1273 aa17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 ZKSCAN4Q969J2 545 aaPredicted RBP17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 ABCF2Q9UG63 623 aa17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 OTOFQ9HC10 1997 aa17.84■□□□□ 0.45
SMARCE1-209ENST00000478349 GSTO1P78417 241 aa17.83■□□□□ 0.44
SMARCE1-209ENST00000478349 TFCP2Q12800 502 aa17.83■□□□□ 0.44
SMARCE1-209ENST00000478349 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
SMARCE1-209ENST00000478349 GAKO14976 1311 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 IRF6O14896 467 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 GNRH1P01148 92 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 ADORA1P30542 326 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 NOL9Q5SY16 702 aaKnown RBP17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 ZSCAN29Q8IWY8 852 aaPredicted RBP17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 XAGE2Q96GT9 111 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 NEUROD6Q96NK8 337 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 IDI2Q9BXS1 227 aa17.82■□□□□ 0.44
SMARCE1-209ENST00000478349 TLR2O60603 784 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 MAP4K4O95819 1239 aaPredicted RBP17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 LDHCP07864 332 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 TIMM10P62072 90 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 NFIAQ12857 509 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 FAM43AQ8N2R8 423 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 FAM163AQ96GL9 167 aaPredicted RBP17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 PICK1Q9NRD5 415 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 ZNF112Q9UJU3 913 aa17.81■□□□□ 0.44
SMARCE1-209ENST00000478349 MYH13Q9UKX3 1938 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 MROH7-TTC4A0A0A0MT08 1334 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 UQCRFS1P1P0C7P4 283 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 INPP5BP32019 993 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 ANKRD23Q86SG2 305 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 NOL10Q9BSC4 688 aaKnown RBP17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 FAM198AQ9UFP1 575 aa17.8■□□□□ 0.44
SMARCE1-209ENST00000478349 BTBD19C9JJ37 291 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 BCAR3O75815 825 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 BTDP43251 543 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 RGS3P49796 1198 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 PRMT2P55345 433 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 PRPF38BQ5VTL8 546 aaKnown RBP17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 ARMC5Q96C12 935 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 KCNH4Q9UQ05 1017 aa17.79■□□□□ 0.44
SMARCE1-209ENST00000478349 SLC9C1Q4G0N8 1177 aa17.78■□□□□ 0.44
SMARCE1-209ENST00000478349 SPATA5Q8NB90 893 aa17.78■□□□□ 0.44
SMARCE1-209ENST00000478349 PARK7Q99497 189 aaKnown RBP17.78■□□□□ 0.44
SMARCE1-209ENST00000478349 TMEM106CQ9BVX2 250 aa17.78■□□□□ 0.44
SMARCE1-209ENST00000478349 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
SMARCE1-209ENST00000478349 CXCL11O14625 94 aa17.77■□□□□ 0.44
SMARCE1-209ENST00000478349 IGSF3O75054 1194 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms