RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TERF2IPQ9NYB0 399 aa4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 GPN3Q9UHW5 284 aaPredicted RBP4.66□□□□□ -1.66
FNDC3B-209ENST00000478016 F8W735 103 aaPredicted RBP4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 SORBS3O60504 671 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 WISP1O95388 367 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 IGHA1P01876 353 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 GATA4P43694 442 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 AP3B2Q13367 1082 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 ANKRD24Q8TF21 1146 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 UBASH3BQ8TF42 649 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 WFDC12Q8WWY7 111 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 DRC1Q96MC2 740 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 FAM161BQ96MY7 647 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 C8orf37Q96NL8 207 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 USP26Q9BXU7 913 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 AKTIPQ9H8T0 292 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 BICRAQ9NZM4 1560 aa4.65□□□□□ -1.67
FNDC3B-209ENST00000478016 LOC100289279A0A1B0GTE1 492 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 RBM47A0AV96 593 aaKnown RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 HMGB1P1B2RPK0 211 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 MSTNO14793 375 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 TCF3P15923 654 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 ZNF16P17020 682 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 MAOBP27338 520 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 NOS3P29474 1203 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 DEKP35659 375 aaKnown RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 IREB2P48200 963 aaKnown RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 ZNF157P51786 506 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 HP1BP3Q5SSJ5 553 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 TPTE2Q6XPS3 522 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 KIAA1211Q6ZU35 1233 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 SPOCK3Q9BQ16 436 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 CORO1BQ9BR76 489 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 TRIM56Q9BRZ2 755 aaKnown RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 HIRIP3Q9BW71 556 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 NRSN2Q9GZP1 204 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 RNF208Q9H0X6 261 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 SLC52A1Q9NWF4 448 aa4.64□□□□□ -1.67
FNDC3B-209ENST00000478016 ANKRD62A6NC57 917 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 ALX3O95076 343 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 PROCP04070 461 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 MMP14P50281 582 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 FAM50AQ14320 339 aaKnown RBP4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 MYBPC2Q14324 1141 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 RALBP1Q15311 655 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 POU4F3Q15319 338 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 Q6ZS46 218 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 TSHZ1Q6ZSZ6 1077 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 AGGF1Q8N302 714 aaeCLIP4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 CRELD1Q96HD1 420 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 NECAB3Q96P71 396 aaPredicted RBP4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 RUSC1Q9BVN2 902 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 CEP41Q9BYV8 373 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 VTI1BQ9UEU0 232 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 TTF2Q9UNY4 1162 aaKnown RBP4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 SAMM50Q9Y512 469 aa4.63□□□□□ -1.67
FNDC3B-209ENST00000478016 ZCCHC6Q5VYS8 1495 aaKnown RBP4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 SCRIBQ14160 1630 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 MEGF11A6BM72 1044 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 ENC1O14682 589 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 CLGNO14967 610 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 FBXO24O75426 580 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 GLB1P16278 677 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 FAM193AP78312 1265 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 HNRNPUQ00839 825 aaKnown RBP eCLIP4.62□□□□□ -1.672e-7■□□□□ 9.9
FNDC3B-209ENST00000478016 CCDC181Q5TID7 509 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 NUTM2GQ5VZR2 741 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 ANKRD34AQ69YU3 496 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 FDX2Q6P4F2 183 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 SV2BQ7L1I2 683 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 SULF2Q8IWU5 870 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 SDR16C5Q8N3Y7 309 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 SREK1Q8WXA9 508 aaKnown RBP4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 ZNF622Q969S3 477 aaKnown RBP eCLIP4.62□□□□□ -1.672e-8■■□□□ 13.3
FNDC3B-209ENST00000478016 TMPRSS13Q9BYE2 586 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 MYO15BQ96JP2 1530 aa4.62□□□□□ -1.67
FNDC3B-209ENST00000478016 DLGAP3O95886 979 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 GSTP1P09211 210 aaKnown RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 NME2P22392 152 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 ARNTP27540 789 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 ST13P50502 369 aaKnown RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 OS9Q13438 667 aaPredicted RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 TAF1CQ15572 869 aaPredicted RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 CCDC85BQ15834 202 aaPredicted RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 EXOSC6Q5RKV6 272 aaKnown RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 MEI1Q5TIA1 1274 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 SMC5Q8IY18 1101 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 DZIP1LQ8IYY4 767 aaKnown RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 MEGF10Q96KG7 1140 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 EMILIN2Q9BXX0 1053 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 SUGCTQ9HAC7 445 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 CYP4F12Q9HCS2 524 aa4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 MAGEC2Q9UBF1 373 aaPredicted RBP4.61□□□□□ -1.67
FNDC3B-209ENST00000478016 EXOC5O00471 708 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 ECEL1O95672 775 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 CELA3AP09093 270 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 CTSHP09668 335 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 MRPL58Q14197 206 aaKnown RBP4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 PDE3AQ14432 1141 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms