RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLA2G5P39877 138 aa9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 ZNF804AQ7Z570 1209 aa9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 PARK7Q99497 189 aaKnown RBP9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
SPTLC1-205ENST00000477888 INPP5BP32019 993 aa9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 CRKP46108 304 aa9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 MFSD14BQ5SR56 506 aa9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 PLA2G12BQ9BX93 195 aa9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 C11orf49Q9H6J7 331 aa9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 MAP3K2Q9Y2U5 619 aa9.44□□□□□ -0.9
SPTLC1-205ENST00000477888 COL2A1P02458 1487 aaPredicted RBP9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 DDX58O95786 925 aaKnown RBP9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 CACNB3P54284 484 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 KSR2Q6VAB6 950 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 MIGA2Q7L4E1 593 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 ZNF112Q9UJU3 913 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 TAOK2Q9UL54 1235 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
SPTLC1-205ENST00000477888 PFASO15067 1338 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 PI4KAP2A4QPH2 592 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 NEURL1BA8MQ27 555 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 CXCL11O14625 94 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 TNPO2O14787 897 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 CASP7P55210 303 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 GRIK5Q16478 980 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 FKBP1CQ5VVH2 108 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 UBE3BQ7Z3V4 1068 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 PI4KAP1Q8N8J0 262 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 FAM122AQ96E09 287 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 ZNF341Q9BYN7 854 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 OGDHLQ9ULD0 1010 aa9.42□□□□□ -0.9
SPTLC1-205ENST00000477888 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
SPTLC1-205ENST00000477888 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
SPTLC1-205ENST00000477888 ZNF853P0CG23 659 aa9.41□□□□□ -0.9
SPTLC1-205ENST00000477888 COL6A1P12109 1028 aa9.41□□□□□ -0.9
SPTLC1-205ENST00000477888 HDLBPQ00341 1268 aaKnown RBP9.41□□□□□ -0.9
SPTLC1-205ENST00000477888 DCAF15Q66K64 600 aa9.41□□□□□ -0.9
SPTLC1-205ENST00000477888 ANKRD18BA2A2Z9 1011 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 TRIM26Q12899 539 aaPredicted RBP9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 TRIM32Q13049 653 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 GCKRQ14397 625 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 TJAP1Q5JTD0 557 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 NOL9Q5SY16 702 aaKnown RBP9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 APOBEC3HQ6NTF7 200 aaKnown RBP9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 COA7Q96BR5 231 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 MRIQ9BWK5 157 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 SLC45A1Q9Y2W3 748 aa9.4□□□□□ -0.9
SPTLC1-205ENST00000477888 A0A0G2JLL6 359 aaPredicted RBP9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 HMGCRP04035 888 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 HIBADHP31937 336 aaKnown RBP9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 GYG1P46976 350 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 NEXNQ0ZGT2 675 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 LRRC26Q2I0M4 334 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 PRRT2Q7Z6L0 340 aaPredicted RBP9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 MYLIPQ8WY64 445 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 FAM84BQ96KN1 310 aaPredicted RBP9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 ZDHHC15Q96MV8 337 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 GJD2Q9UKL4 321 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 ALPK3Q96L96 1907 aa9.39□□□□□ -0.91
SPTLC1-205ENST00000477888 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
SPTLC1-205ENST00000477888 MAP3K21Q5TCX8 1036 aa9.38□□□□□ -0.91
SPTLC1-205ENST00000477888 C8orf58Q8NAV2 365 aa9.38□□□□□ -0.91
SPTLC1-205ENST00000477888 TEKT1Q969V4 418 aa9.38□□□□□ -0.91
SPTLC1-205ENST00000477888 TMOD2Q9NZR1 351 aa9.38□□□□□ -0.91
SPTLC1-205ENST00000477888 ECM29Q5VYK3 1845 aa9.38□□□□□ -0.91
SPTLC1-205ENST00000477888 RPAP1Q9BWH6 1393 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 FOXO4P98177 505 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 CCDC30Q5VVM6 783 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 CCDC146Q8IYE0 955 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 ANKRD13CQ8N6S4 541 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 SMCR8Q8TEV9 937 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 FAM151AQ8WW52 585 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 AFG3L2Q9Y4W6 797 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 ZHX2Q9Y6X8 837 aa9.37□□□□□ -0.91
SPTLC1-205ENST00000477888 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 PHF20L1A8MW92 1017 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 PLIN1O60240 522 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 FOSL2P15408 326 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 PTPRAP18433 802 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms