RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 CCDC8Q9H0W5 538 aaPredicted RBP11.97□□□□□ -0.49
NIFK-205ENST00000477693 ZNF408Q9H9D4 720 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 ABT1Q9ULW3 272 aaKnown RBP11.97□□□□□ -0.49
NIFK-205ENST00000477693 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
NIFK-205ENST00000477693 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.49
NIFK-205ENST00000477693 CLRN2A0PK11 232 aa11.96□□□□□ -0.49
NIFK-205ENST00000477693 TNFAIP1Q13829 316 aa11.96□□□□□ -0.49
NIFK-205ENST00000477693 SPTY2D1Q68D10 685 aaPredicted RBP11.96□□□□□ -0.49
NIFK-205ENST00000477693 DEFB129Q9H1M3 183 aa11.96□□□□□ -0.49
NIFK-205ENST00000477693 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
NIFK-205ENST00000477693 GBA2Q9HCG7 927 aaPredicted RBP11.96□□□□□ -0.49
NIFK-205ENST00000477693 IL1RAPL2Q9NP60 686 aa11.96□□□□□ -0.49
NIFK-205ENST00000477693 ZNF70Q9UC06 446 aaPredicted RBP11.96□□□□□ -0.49
NIFK-205ENST00000477693 APBB1O00213 710 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 IGSF3O75054 1194 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
NIFK-205ENST00000477693 FKBP1BP68106 108 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 NUCB1Q02818 461 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 DEFB115Q30KQ5 88 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 C2orf69Q8N8R5 385 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
NIFK-205ENST00000477693 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 ABCF2Q9UG63 623 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
NIFK-205ENST00000477693 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 PAPPA2Q9BXP8 1791 aa11.95□□□□□ -0.5
NIFK-205ENST00000477693 GAKO14976 1311 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 NF2P35240 595 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 NUBP1P53384 320 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 FKBP1CQ5VVH2 108 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
NIFK-205ENST00000477693 SLF2Q8IX21 1173 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
NIFK-205ENST00000477693 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
NIFK-205ENST00000477693 IFIT2P09913 472 aaKnown RBP11.93□□□□□ -0.5
NIFK-205ENST00000477693 TNNI2P48788 182 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 VEGFBP49765 207 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 HUNKP57058 714 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 MECOMQ03112 1051 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 RASA3Q14644 834 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 TBC1D9Q6ZT07 1266 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.93□□□□□ -0.5
NIFK-205ENST00000477693 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 NSUN4Q96CB9 384 aaKnown RBP11.93□□□□□ -0.5
NIFK-205ENST00000477693 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
NIFK-205ENST00000477693 SSC5DA1L4H1 1573 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 MROH7-TTC4A0A0A0MT08 1334 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 ECE1P42892 770 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 ZAP70P43403 619 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 CDC42EP5Q6NZY7 148 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 TEPSINQ96N21 525 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 TMOD2Q9NZR1 351 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 THSD7BQ9C0I4 1608 aa11.92□□□□□ -0.5
NIFK-205ENST00000477693 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
NIFK-205ENST00000477693 WDR33Q9C0J8 1336 aaKnown RBP11.91□□□□□ -0.5
NIFK-205ENST00000477693 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 TCP10L2B9ZVM9 353 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
NIFK-205ENST00000477693 CLCN6P51797 869 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 CACNB3P54284 484 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 GSTO1P78417 241 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 MAP3K11Q16584 847 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 SUPT20HL1Q3ZLR7 823 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 ANKRD45Q5TZF3 282 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 RGMBQ6NW40 437 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 CAPNS2Q96L46 248 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 RAI14Q9P0K7 980 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
NIFK-205ENST00000477693 FOXN1O15353 648 aa11.9□□□□□ -0.5
NIFK-205ENST00000477693 SMARCA5O60264 1052 aaPredicted RBP11.9□□□□□ -0.5
NIFK-205ENST00000477693 LDHCP07864 332 aa11.9□□□□□ -0.5
NIFK-205ENST00000477693 BTDP43251 543 aa11.9□□□□□ -0.5
NIFK-205ENST00000477693 NBPF12Q5TAG4 269 aaPredicted RBP11.9□□□□□ -0.5
NIFK-205ENST00000477693 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
NIFK-205ENST00000477693 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
NIFK-205ENST00000477693 TMEM39BQ9GZU3 492 aa11.9□□□□□ -0.5
NIFK-205ENST00000477693 PIH1D3Q9NQM4 214 aaKnown RBP11.9□□□□□ -0.5
NIFK-205ENST00000477693 MYH2Q9UKX2 1941 aa11.9□□□□□ -0.51
NIFK-205ENST00000477693 UNCXA6NJT0 531 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
NIFK-205ENST00000477693 ATP5JP18859 108 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 NFIAQ12857 509 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 TTF1Q15361 905 aaPredicted RBP11.89□□□□□ -0.51
NIFK-205ENST00000477693 LDLRAD1Q5T700 205 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 NAA16Q6N069 864 aaPredicted RBP11.89□□□□□ -0.51
NIFK-205ENST00000477693 MOB2Q70IA6 237 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 ARMC9Q7Z3E5 817 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms