RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TTC39AQ5SRH9 613 aa21.7■■□□□ 1.06
PTPN7-209ENST00000477554 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
PTPN7-209ENST00000477554 RHPN1Q8TCX5 695 aa21.7■■□□□ 1.06
PTPN7-209ENST00000477554 FAM198AQ9UFP1 575 aa21.7■■□□□ 1.06
PTPN7-209ENST00000477554 CYP2E1P05181 493 aaPredicted RBP21.69■■□□□ 1.06
PTPN7-209ENST00000477554 NEFLP07196 543 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 ZAP70P43403 619 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 MAP2K1Q02750 393 aaPredicted RBP21.69■■□□□ 1.06
PTPN7-209ENST00000477554 TCP10Q12799 353 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 NOGQ13253 232 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 AACSQ86V21 672 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 CSRNP1Q96S65 589 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 GAKO14976 1311 aa21.69■■□□□ 1.06
PTPN7-209ENST00000477554 GJA5P36382 358 aa21.68■■□□□ 1.06
PTPN7-209ENST00000477554 DZIP1Q86YF9 867 aaKnown RBP21.68■■□□□ 1.06
PTPN7-209ENST00000477554 CCDC102AQ96A19 550 aa21.68■■□□□ 1.06
PTPN7-209ENST00000477554 PIH1D3Q9NQM4 214 aaKnown RBP21.68■■□□□ 1.06
PTPN7-209ENST00000477554 USP40Q9NVE5 1235 aa21.68■■□□□ 1.06
PTPN7-209ENST00000477554 MAP3K11Q16584 847 aa21.67■■□□□ 1.06
PTPN7-209ENST00000477554 ARMC9Q7Z3E5 817 aa21.67■■□□□ 1.06
PTPN7-209ENST00000477554 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
PTPN7-209ENST00000477554 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
PTPN7-209ENST00000477554 NSUN4Q96CB9 384 aaKnown RBP21.67■■□□□ 1.06
PTPN7-209ENST00000477554 RFX7Q2KHR2 1363 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 SMARCA5O60264 1052 aaPredicted RBP21.66■■□□□ 1.06
PTPN7-209ENST00000477554 BTDP43251 543 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 TNFAIP1Q13829 316 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 ADGRA1Q86SQ6 560 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 ANTXR1Q9H6X2 564 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 DDX4Q9NQI0 724 aaKnown RBP21.66■■□□□ 1.06
PTPN7-209ENST00000477554 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
PTPN7-209ENST00000477554 MROH7-TTC4A0A0A0MT08 1334 aa21.65■■□□□ 1.06
PTPN7-209ENST00000477554 UQCRFS1P1P0C7P4 283 aa21.65■■□□□ 1.06
PTPN7-209ENST00000477554 CTCFP49711 727 aaPredicted RBP21.65■■□□□ 1.06
PTPN7-209ENST00000477554 SUPT20HL1Q3ZLR7 823 aa21.65■■□□□ 1.06
PTPN7-209ENST00000477554 CRBNQ96SW2 442 aa21.65■■□□□ 1.06
PTPN7-209ENST00000477554 RAI14Q9P0K7 980 aa21.65■■□□□ 1.06
PTPN7-209ENST00000477554 CCDC158Q5M9N0 1113 aa21.64■■□□□ 1.06
PTPN7-209ENST00000477554 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.64■■□□□ 1.06
PTPN7-209ENST00000477554 MIGA2Q7L4E1 593 aa21.64■■□□□ 1.06
PTPN7-209ENST00000477554 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.06
PTPN7-209ENST00000477554 ZGPATQ8N5A5 531 aaKnown RBP21.64■■□□□ 1.06
PTPN7-209ENST00000477554 WDHD1O75717 1129 aaPredicted RBP21.63■■□□□ 1.05
PTPN7-209ENST00000477554 RHBDL3P58872 404 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 FAM83AQ86UY5 434 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 MAST2Q6P0Q8 1798 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 AK9Q5TCS8 1911 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 PPP1R12BO60237 982 aaPredicted RBP21.63■■□□□ 1.05
PTPN7-209ENST00000477554 TNNI2P48788 182 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 RGS3P49796 1198 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 SPRYD7Q5W111 196 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 ERC1Q8IUD2 1116 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 FAM163AQ96GL9 167 aaPredicted RBP21.63■■□□□ 1.05
PTPN7-209ENST00000477554 ELP3Q9H9T3 547 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 RNF186Q9NXI6 227 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 TMOD2Q9NZR1 351 aa21.63■■□□□ 1.05
PTPN7-209ENST00000477554 CASP8AP2Q9UKL3 1982 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 GPR75-ASB3A0A0A6YYF3 556 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 HMMRO75330 724 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 TRPA1O75762 1119 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 FKBP1CQ5VVH2 108 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 SPTY2D1Q68D10 685 aaPredicted RBP21.62■■□□□ 1.05
PTPN7-209ENST00000477554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.62■■□□□ 1.05
PTPN7-209ENST00000477554 FAM151AQ8WW52 585 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 KIF1BPQ96EK5 621 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 EDC3Q96F86 508 aaKnown RBP21.62■■□□□ 1.05
PTPN7-209ENST00000477554 ZNF512BQ96KM6 892 aaPredicted RBP21.62■■□□□ 1.05
PTPN7-209ENST00000477554 LRP2BPQ9P2M1 347 aa21.62■■□□□ 1.05
PTPN7-209ENST00000477554 PICALMQ13492 652 aa21.61■■□□□ 1.05
PTPN7-209ENST00000477554 VGLL4Q14135 290 aa21.61■■□□□ 1.05
PTPN7-209ENST00000477554 ZKSCAN4Q969J2 545 aaPredicted RBP21.61■■□□□ 1.05
PTPN7-209ENST00000477554 SLC10A4Q96EP9 437 aa21.61■■□□□ 1.05
PTPN7-209ENST00000477554 WNK4Q96J92 1243 aa21.61■■□□□ 1.05
PTPN7-209ENST00000477554 CDK5RAP2Q96SN8 1893 aa21.61■■□□□ 1.05
PTPN7-209ENST00000477554 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
PTPN7-209ENST00000477554 DDTLA6NHG4 134 aaPredicted RBP21.6■■□□□ 1.05
PTPN7-209ENST00000477554 IREB2P48200 963 aaKnown RBP21.6■■□□□ 1.05
PTPN7-209ENST00000477554 BEGAINQ9BUH8 593 aa21.6■■□□□ 1.05
PTPN7-209ENST00000477554 R3HDMLQ9H3Y0 253 aa21.6■■□□□ 1.05
PTPN7-209ENST00000477554 ATRNL1Q5VV63 1379 aa21.6■■□□□ 1.05
PTPN7-209ENST00000477554 RPAP1Q9BWH6 1393 aaPredicted RBP21.6■■□□□ 1.05
PTPN7-209ENST00000477554 INPP5BP32019 993 aa21.59■■□□□ 1.05
PTPN7-209ENST00000477554 SH3RF3Q8TEJ3 882 aaPredicted RBP21.59■■□□□ 1.05
PTPN7-209ENST00000477554 IDI2Q9BXS1 227 aa21.59■■□□□ 1.05
PTPN7-209ENST00000477554 LAMB1P07942 1786 aa21.58■■□□□ 1.05
PTPN7-209ENST00000477554 CHGBP05060 677 aa21.58■■□□□ 1.05
PTPN7-209ENST00000477554 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
PTPN7-209ENST00000477554 SLFNL1Q499Z3 407 aa21.58■■□□□ 1.05
PTPN7-209ENST00000477554 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.05
PTPN7-209ENST00000477554 PRDM10Q9NQV6 1147 aa21.58■■□□□ 1.05
PTPN7-209ENST00000477554 SNCAIPQ9Y6H5 919 aa21.58■■□□□ 1.05
PTPN7-209ENST00000477554 RAB11FIP3O75154 756 aa21.57■■□□□ 1.04
PTPN7-209ENST00000477554 DYNLL1P63167 89 aaKnown RBP21.57■■□□□ 1.04
PTPN7-209ENST00000477554 ANKRD13AQ8IZ07 590 aa21.57■■□□□ 1.04
PTPN7-209ENST00000477554 CLASRPQ8N2M8 674 aaKnown RBP21.57■■□□□ 1.04
PTPN7-209ENST00000477554 OPTNQ96CV9 577 aa21.57■■□□□ 1.04
PTPN7-209ENST00000477554 WRNIP1Q96S55 665 aa21.57■■□□□ 1.04
PTPN7-209ENST00000477554 CHMP4BQ9H444 224 aaKnown RBP21.57■■□□□ 1.04
PTPN7-209ENST00000477554 AATFQ9NY61 560 aaKnown RBP eCLIP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms