RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 RASSF10A6NK89 507 aa11.83□□□□□ -0.52
HDAC3-208ENST00000476739 ATP5JP18859 108 aa11.83□□□□□ -0.52
HDAC3-208ENST00000476739 BTDP43251 543 aa11.83□□□□□ -0.52
HDAC3-208ENST00000476739 VEGFBP49765 207 aa11.83□□□□□ -0.52
HDAC3-208ENST00000476739 CYP4F22Q6NT55 531 aa11.83□□□□□ -0.52
HDAC3-208ENST00000476739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.83□□□□□ -0.52
HDAC3-208ENST00000476739 DNAJC2Q99543 621 aaKnown RBP11.83□□□□□ -0.52
HDAC3-208ENST00000476739 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 GOLIM4O00461 696 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 IDH1O75874 414 aaKnown RBP11.82□□□□□ -0.52
HDAC3-208ENST00000476739 HUNKP57058 714 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 RHBDL3P58872 404 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 TCP10Q12799 353 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 NAA16Q6N069 864 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-208ENST00000476739 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 C2orf69Q8N8R5 385 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 GCC1Q96CN9 775 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 RWDD1Q9H446 243 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-208ENST00000476739 DDX4Q9NQI0 724 aaKnown RBP11.82□□□□□ -0.52
HDAC3-208ENST00000476739 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 PPP2R3BQ9Y5P8 575 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
HDAC3-208ENST00000476739 RFX7Q2KHR2 1363 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 WDHD1O75717 1129 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-208ENST00000476739 CHGBP05060 677 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 GSTO1P78417 241 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 GRM1Q13255 1194 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 TNFAIP1Q13829 316 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-208ENST00000476739 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 MAGEB6Q8N7X4 407 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 HAUS7Q99871 368 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 AATFQ9NY61 560 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC3-208ENST00000476739 TMOD2Q9NZR1 351 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 SALL3Q9BXA9 1300 aa11.81□□□□□ -0.52
HDAC3-208ENST00000476739 WDR33Q9C0J8 1336 aaKnown RBP11.81□□□□□ -0.52
HDAC3-208ENST00000476739 CYP7A1P22680 504 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 TNNI2P48788 182 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 DYNLL1P63167 89 aaKnown RBP11.8□□□□□ -0.52
HDAC3-208ENST00000476739 TTLL12Q14166 644 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-208ENST00000476739 FKBP1CQ5VVH2 108 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 FAM83AQ86UY5 434 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 SLF2Q8IX21 1173 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 PI4K2BQ8TCG2 481 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-208ENST00000476739 CAPNS2Q96L46 248 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 ZIC5Q96T25 663 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 PAG1Q9NWQ8 432 aa11.8□□□□□ -0.52
HDAC3-208ENST00000476739 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
HDAC3-208ENST00000476739 FAM155AB1AL88 458 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-208ENST00000476739 AOC2O75106 756 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-208ENST00000476739 MAP4K4O95819 1239 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-208ENST00000476739 LDHCP07864 332 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 NF2P35240 595 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 RGS3P49796 1198 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 FKBP1BP68106 108 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 PICALMQ13492 652 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 RGMBQ6NW40 437 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 JMYQ8N9B5 988 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 HHIPL1Q96JK4 782 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 LNPKQ9C0E8 428 aa11.79□□□□□ -0.52
HDAC3-208ENST00000476739 CDK5RAP2Q96SN8 1893 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-208ENST00000476739 PDE6AP16499 860 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 ZNF157P51786 506 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-208ENST00000476739 PPP4CP60510 307 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 TTF1Q15361 905 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-208ENST00000476739 MAP3K11Q16584 847 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 SUPT20HL1Q3ZLR7 823 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 SLC9C2Q5TAH2 1124 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 MIGA2Q7L4E1 593 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 MIGA1Q8NAN2 632 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-208ENST00000476739 TTC41PQ6P2S7 1318 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 AK9Q5TCS8 1911 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 RPAP1Q9BWH6 1393 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-208ENST00000476739 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
HDAC3-208ENST00000476739 MX1P20591 662 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 NUCB1Q02818 461 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 ARMC9Q7Z3E5 817 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 CHD1LQ86WJ1 897 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 RASAL3Q86YV0 1011 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
HDAC3-208ENST00000476739 ZNF532Q9HCE3 1301 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms