RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SLC5A1P13866 664 aa19.2■□□□□ 0.66
TMEM53-208ENST00000476724 CCDC73Q6ZRK6 1079 aa19.2■□□□□ 0.66
TMEM53-208ENST00000476724 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
TMEM53-208ENST00000476724 NPHP1O15259 732 aa19.2■□□□□ 0.66
TMEM53-208ENST00000476724 AP5Z1O43299 807 aa19.2■□□□□ 0.66
TMEM53-208ENST00000476724 ANTXR2P58335 489 aa19.2■□□□□ 0.66
TMEM53-208ENST00000476724 CBX8Q9HC52 389 aa19.2■□□□□ 0.66
TMEM53-208ENST00000476724 PIH1D3Q9NQM4 214 aaKnown RBP19.2■□□□□ 0.66
TMEM53-208ENST00000476724 BSDC1Q9NW68 430 aaPredicted RBP19.2■□□□□ 0.66
TMEM53-208ENST00000476724 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
TMEM53-208ENST00000476724 CPLX1O14810 134 aa19.19■□□□□ 0.66
TMEM53-208ENST00000476724 IDH1O75874 414 aaKnown RBP19.19■□□□□ 0.66
TMEM53-208ENST00000476724 TM4SF1P30408 202 aa19.19■□□□□ 0.66
TMEM53-208ENST00000476724 CEBPZQ03701 1054 aaKnown RBP19.19■□□□□ 0.66
TMEM53-208ENST00000476724 ALX1Q15699 326 aa19.19■□□□□ 0.66
TMEM53-208ENST00000476724 TDRD7Q8NHU6 1098 aaKnown RBP19.19■□□□□ 0.66
TMEM53-208ENST00000476724 C8orf76Q96K31 380 aa19.19■□□□□ 0.66
TMEM53-208ENST00000476724 RTEL1Q9NZ71 1219 aa19.19■□□□□ 0.66
TMEM53-208ENST00000476724 HPS5Q9UPZ3 1129 aa19.19■□□□□ 0.66
TMEM53-208ENST00000476724 GOLGA8BA8MQT2 603 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 PRR5LQ6MZQ0 368 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 BRAPQ7Z569 592 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 FBXO18Q8NFZ0 1043 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 MINPP1Q9UNW1 487 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 ZMYM6O95789 1325 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 ZNF532Q9HCE3 1301 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 PDE6AP16499 860 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 ZNF165P49910 485 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 FOSBP53539 338 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 FAM160A1Q05DH4 1040 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 LUZP1Q86V48 1076 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 CNBD1Q8NA66 436 aa19.18■□□□□ 0.66
TMEM53-208ENST00000476724 GPHNQ9NQX3 736 aaPredicted RBP19.18■□□□□ 0.66
TMEM53-208ENST00000476724 ORC3Q9UBD5 711 aaPredicted RBP19.18■□□□□ 0.66
TMEM53-208ENST00000476724 ANGEL1Q9UNK9 670 aaKnown RBP19.18■□□□□ 0.66
TMEM53-208ENST00000476724 BCAMP50895 628 aa19.17■□□□□ 0.66
TMEM53-208ENST00000476724 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.663e-11■□□□□ 9.8
TMEM53-208ENST00000476724 ADALQ6DHV7 355 aa19.17■□□□□ 0.66
TMEM53-208ENST00000476724 ILDR1Q86SU0 546 aaPredicted RBP19.17■□□□□ 0.66
TMEM53-208ENST00000476724 TMEM87BQ96K49 555 aa19.17■□□□□ 0.66
TMEM53-208ENST00000476724 TCRBV5S4A2TA0A5A2 114 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 KINO60870 393 aaKnown RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 ME1P48163 572 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 GUCY1B3Q02153 619 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 SLC51AQ86UW1 340 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 ENGASEQ8NFI3 743 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 TTC12Q9H892 705 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 A0A1W2PQ27 194 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 A0A1W2PQ64 194 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 A0A1W2PQD8 194 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 CDKL5O76039 1030 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 YEATS4O95619 227 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 APPP05067 770 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 RPS8P62241 208 aaKnown RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 SNW1Q13573 536 aaKnown RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 SPATA5Q8NB90 893 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 AIDAQ96BJ3 306 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 ZNF830Q96NB3 372 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 STRBPQ96SI9 672 aaKnown RBP19.16■□□□□ 0.66
TMEM53-208ENST00000476724 POLR3EQ9NVU0 708 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 TFCP2L1Q9NZI6 479 aa19.16■□□□□ 0.66
TMEM53-208ENST00000476724 SERPINB2P05120 415 aa19.15■□□□□ 0.66
TMEM53-208ENST00000476724 DDR1Q08345 913 aa19.15■□□□□ 0.66
TMEM53-208ENST00000476724 RASGRF1Q13972 1273 aa19.15■□□□□ 0.66
TMEM53-208ENST00000476724 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
TMEM53-208ENST00000476724 NBPF3Q9H094 633 aa19.15■□□□□ 0.66
TMEM53-208ENST00000476724 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
TMEM53-208ENST00000476724 CPLX2Q6PUV4 134 aaKnown RBP19.15■□□□□ 0.66
TMEM53-208ENST00000476724 SPTLC3Q9NUV7 552 aa19.15■□□□□ 0.66
TMEM53-208ENST00000476724 DOCK2Q92608 1830 aa19.14■□□□□ 0.65
TMEM53-208ENST00000476724 STX1AQ16623 288 aa19.14■□□□□ 0.65
TMEM53-208ENST00000476724 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
TMEM53-208ENST00000476724 LINC00301Q8NCQ3 95 aa19.14■□□□□ 0.65
TMEM53-208ENST00000476724 FTOQ9C0B1 505 aaKnown RBP eCLIP19.14■□□□□ 0.65
TMEM53-208ENST00000476724 DNAJC25Q9H1X3 360 aa19.14■□□□□ 0.65
TMEM53-208ENST00000476724 SH2B2O14492 632 aaPredicted RBP19.13■□□□□ 0.65
TMEM53-208ENST00000476724 TBC1D10CQ8IV04 446 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 FSIP1Q8NA03 581 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 FBXO41Q8TF61 875 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 MRPS27Q92552 414 aaKnown RBP19.13■□□□□ 0.65
TMEM53-208ENST00000476724 GOLPH3LQ9H4A5 285 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 WWC3Q9ULE0 1092 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 SYNE3Q6ZMZ3 975 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 MPNDQ8N594 471 aa19.13■□□□□ 0.65
TMEM53-208ENST00000476724 POLRMTO00411 1230 aaKnown RBP19.12■□□□□ 0.65
TMEM53-208ENST00000476724 GYG1P46976 350 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 METAP2P50579 478 aaKnown RBP eCLIP19.12■□□□□ 0.65
TMEM53-208ENST00000476724 STK38Q15208 465 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 SF3A1Q15459 793 aaKnown RBP19.12■□□□□ 0.65
TMEM53-208ENST00000476724 MYSM1Q5VVJ2 828 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 CYB5R4Q7L1T6 521 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 PLA2G4DQ86XP0 818 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 TRIM5Q9C035 493 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 ANO10Q9NW15 660 aa19.12■□□□□ 0.65
TMEM53-208ENST00000476724 IQSEC3Q9UPP2 1182 aaPredicted RBP19.12■□□□□ 0.65
TMEM53-208ENST00000476724 GOLGA6L19H0YKK7 550 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms