RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ZNF335Q9H4Z2 1342 aaPredicted RBP9.69□□□□□ -0.86
VAPB-205ENST00000476395 MYH3P11055 1940 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 BCORQ6W2J9 1755 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 GOLGA6L19H0YKK7 550 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 GUCY1B3Q02153 619 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 DPCR1Q3MIW9 517 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 ARMCX5Q6P1M9 558 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 LMOD2Q6P5Q4 547 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 MB21D2Q8IYB1 491 aaPredicted RBP9.69□□□□□ -0.86
VAPB-205ENST00000476395 CABLES1Q8TDN4 633 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 GPR108Q9NPR9 543 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 ADORA1P30542 326 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 PSEN1P49768 467 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 NEXNQ0ZGT2 675 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
VAPB-205ENST00000476395 LINC00301Q8NCQ3 95 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 ZNF274Q96GC6 653 aaPredicted RBP9.69□□□□□ -0.86
VAPB-205ENST00000476395 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 TSPYL1Q9H0U9 437 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 RTEL1Q9NZ71 1219 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 MUM1L1Q5H9M0 696 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 ICE2Q659A1 982 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 AOPEPQ8N6M6 819 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 FMNL2Q96PY5 1086 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 EFCC1Q9HA90 598 aa9.69□□□□□ -0.86
VAPB-205ENST00000476395 WDHD1O75717 1129 aaPredicted RBP9.68□□□□□ -0.86
VAPB-205ENST00000476395 IFNL2Q8IZJ0 200 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 ZSWIM4Q9H7M6 989 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 ITGB4P16144 1822 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 N4BP1O75113 896 aaKnown RBP9.68□□□□□ -0.86
VAPB-205ENST00000476395 PI16Q6UXB8 463 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 TXLNBQ8N3L3 684 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 UBXN4Q92575 508 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 PUS7LQ9H0K6 701 aaKnown RBP9.68□□□□□ -0.86
VAPB-205ENST00000476395 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 A0A1B0GVL5 298 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 UBE2Q2LH0YL09 131 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 URI1O94763 535 aaPredicted RBP9.68□□□□□ -0.86
VAPB-205ENST00000476395 STX1AQ16623 288 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 WWC2Q6AWC2 1192 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 OSBPL5Q9H0X9 879 aaPredicted RBP9.68□□□□□ -0.86
VAPB-205ENST00000476395 SUGCTQ9HAC7 445 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 ADAM21Q9UKJ8 722 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 CFAP45Q9UL16 551 aa9.68□□□□□ -0.86
VAPB-205ENST00000476395 A0A1B0GUL7 405 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 CHRNA2Q15822 529 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 CT47A1Q5JQC4 288 aaPredicted RBP9.67□□□□□ -0.86
VAPB-205ENST00000476395 TEX35Q5T0J7 233 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 BECN2A8MW95 431 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 RNF113AO15541 343 aaKnown RBP9.67□□□□□ -0.86
VAPB-205ENST00000476395 A1BGP04217 495 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 TMC6Q7Z403 805 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 UBXN6Q9BZV1 441 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 NLRP2Q9NX02 1062 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 DCCP43146 1447 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 GNL2Q13823 731 aaKnown RBP9.67□□□□□ -0.86
VAPB-205ENST00000476395 HSP90AB3PQ58FF7 597 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.67□□□□□ -0.86
VAPB-205ENST00000476395 AIFM3Q96NN9 605 aa9.67□□□□□ -0.86
VAPB-205ENST00000476395 CPDO75976 1380 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 COL22A1Q8NFW1 1626 aaPredicted RBP9.66□□□□□ -0.86
VAPB-205ENST00000476395 ATRNO75882 1429 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 A0A1W2PQ27 194 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 A0A1W2PQ64 194 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 A0A1W2PQD8 194 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 EYA2O00167 538 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 TFRCP02786 760 aaKnown RBP9.66□□□□□ -0.86
VAPB-205ENST00000476395 ISM2Q6H9L7 571 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 FSIP1Q8NA03 581 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 BPIFA3Q9BQP9 254 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 GEMIN8Q9NWZ8 242 aaKnown RBP9.66□□□□□ -0.86
VAPB-205ENST00000476395 JRKLQ9Y4A0 524 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 CASZ1Q86V15 1759 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 TNS3Q68CZ2 1445 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 H3BQV1 296 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 TADA3O75528 432 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 CIAO1O76071 339 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 CAVIN2O95810 425 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 FGAP02671 866 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 BMP6P22004 513 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 CC2D1AQ6P1N0 951 aaPredicted RBP9.66□□□□□ -0.86
VAPB-205ENST00000476395 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
VAPB-205ENST00000476395 SMC2O95347 1197 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 TPM4P67936 248 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 SYNE4Q8N205 404 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 FBXO18Q8NFZ0 1043 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 MAP3K14Q99558 947 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 XPO4Q9C0E2 1151 aaKnown RBP9.65□□□□□ -0.86
VAPB-205ENST00000476395 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
VAPB-205ENST00000476395 INTS13Q9NVM9 706 aa9.65□□□□□ -0.86
VAPB-205ENST00000476395 POLR3EQ9NVU0 708 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms