RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 FAM83AQ86UY5 434 aa13.94□□□□□ -0.18
EXOSC1-208ENST00000476234 SH3TC2Q8TF17 1288 aa13.94□□□□□ -0.18
EXOSC1-208ENST00000476234 SHISA4Q96DD7 197 aa13.94□□□□□ -0.18
EXOSC1-208ENST00000476234 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
EXOSC1-208ENST00000476234 UTYO14607 1347 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 MROH5Q6ZUA9 1318 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 SNAPC2Q13487 334 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 KIF22Q14807 665 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 UBE2Q1Q7Z7E8 422 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 ANKRD44Q8N8A2 993 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 ZDHHC15Q96MV8 337 aa13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 C9orf78Q9NZ63 289 aaPredicted RBP13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 RPAP1Q9BWH6 1393 aaPredicted RBP13.93□□□□□ -0.18
EXOSC1-208ENST00000476234 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 CTGFP29279 349 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 APOBEC3HQ6NTF7 200 aaKnown RBP13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 ZKSCAN4Q969J2 545 aaPredicted RBP13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 TEKT1Q969V4 418 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 HOOK2Q96ED9 719 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 WRNIP1Q96S55 665 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 SUGT1Q9Y2Z0 365 aa13.92□□□□□ -0.18
EXOSC1-208ENST00000476234 CEP290O15078 2479 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 CACNB3P54284 484 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 PPATQ06203 517 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 MTFR1Q15390 333 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 ANKRD23Q86SG2 305 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 USP44Q9H0E7 712 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 PRO3102Q9H379 93 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 BICC1Q9H694 974 aaKnown RBP13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 SRRDQ9UH36 339 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 TRIOBPQ9H2D6 2365 aa13.91□□□□□ -0.18
EXOSC1-208ENST00000476234 MYCP01106 439 aaPredicted RBP13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 MOGSQ13724 837 aa13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 RABL6Q3YEC7 729 aaPredicted RBP13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 DCAF15Q66K64 600 aa13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 KCNH4Q9UQ05 1017 aa13.9□□□□□ -0.18
EXOSC1-208ENST00000476234 PTPRCP08575 1304 aa13.9□□□□□ -0.19
EXOSC1-208ENST00000476234 KIF16BQ96L93 1317 aa13.9□□□□□ -0.19
EXOSC1-208ENST00000476234 SZT2Q5T011 3432 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 GJB1P08034 283 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 PSMC4P43686 418 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 GJA8P48165 433 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 ZNF341Q9BYN7 854 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 RBM27Q9P2N5 1060 aaKnown RBP13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
EXOSC1-208ENST00000476234 RANBP2P49792 3224 aaKnown RBP13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 PDE8BO95263 885 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 OSBPP22059 807 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 HOXD10P28358 340 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 EVX2Q03828 476 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 CHAF1AQ13111 956 aaPredicted RBP13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 VPS37DQ86XT2 251 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 MAST3O60307 1309 aa13.88□□□□□ -0.19
EXOSC1-208ENST00000476234 PDHXO00330 501 aa13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 FGFR2P21802 821 aa13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 INPP5BP32019 993 aa13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 GRK4P32298 578 aa13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 BCAMP50895 628 aa13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 FAM151AQ8WW52 585 aa13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
EXOSC1-208ENST00000476234 BCRP11274 1271 aa13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 CCL5P13501 91 aa13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 RARSP54136 660 aaKnown RBP13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 MIGA2Q7L4E1 593 aa13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 TNNQ9UQP3 1299 aa13.86□□□□□ -0.19
EXOSC1-208ENST00000476234 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
EXOSC1-208ENST00000476234 GPAT2Q6NUI2 795 aa13.85□□□□□ -0.19
EXOSC1-208ENST00000476234 RAET1EQ8TD07 263 aa13.85□□□□□ -0.19
EXOSC1-208ENST00000476234 DPF3Q92784 378 aa13.85□□□□□ -0.19
EXOSC1-208ENST00000476234 HTATIP2Q9BUP3 242 aa13.85□□□□□ -0.19
EXOSC1-208ENST00000476234 MYPNQ86TC9 1320 aa13.85□□□□□ -0.19
EXOSC1-208ENST00000476234 CXCL11O14625 94 aa13.84□□□□□ -0.19
EXOSC1-208ENST00000476234 FMNL1O95466 1100 aaPredicted RBP13.84□□□□□ -0.19
EXOSC1-208ENST00000476234 CAPN2P17655 700 aa13.84□□□□□ -0.19
EXOSC1-208ENST00000476234 CDC42EP5Q6NZY7 148 aa13.84□□□□□ -0.19
EXOSC1-208ENST00000476234 DAGLAQ9Y4D2 1042 aa13.84□□□□□ -0.19
EXOSC1-208ENST00000476234 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.19
EXOSC1-208ENST00000476234 A0A1W2PPC1 479 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 UBXN2AP68543 259 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 PRKCZQ05513 592 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms