RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
CCDC66-216ENST00000476142 GOLGA8AA7E2F4 631 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 GSG1L2A8MUP6 293 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 TOM1O60784 492 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 OFD1O75665 1012 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 KIAA2012Q0VF49 1180 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 ATL3Q6DD88 541 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
CCDC66-216ENST00000476142 SYNE3Q6ZMZ3 975 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 MFSD6Q6ZSS7 791 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 ALG1Q9BT22 464 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 MYH7P12883 1935 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 CCDC69A6NI79 296 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 KIF28PB7ZC32 967 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 CDKL5O76039 1030 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 CDC27P30260 824 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 FAM182BQ5T319 152 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 ZSWIM5Q9P217 1185 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 PCDHA7Q9UN72 937 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 SLC12A7Q9Y666 1083 aa10.41□□□□□ -0.74
CCDC66-216ENST00000476142 A0A087WWV3 80 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 ZNF165P49910 485 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 TBC1D9BQ66K14 1250 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 CLEC4GQ6UXB4 293 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 ERCC4Q92889 916 aaPredicted RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 LY9Q9HBG7 655 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 GNL3LQ9NVN8 582 aaKnown RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 R3HCC1Q9Y3T6 440 aaKnown RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 A0A1B0GVL5 298 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 MINDY4BA8MYZ0 360 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 NPHP1O15259 732 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 FAM160A1Q05DH4 1040 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 ALX1Q15699 326 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 AKNAD1Q5T1N1 836 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 MYSM1Q5VVJ2 828 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 RBM43Q6ZSC3 357 aaKnown RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 DRC7Q8IY82 874 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 SDR42E1Q8WUS8 393 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 MRPS27Q92552 414 aaKnown RBP10.4□□□□□ -0.74
CCDC66-216ENST00000476142 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
CCDC66-216ENST00000476142 MYH14Q7Z406 1995 aaKnown RBP10.4□□□□□ -0.75
CCDC66-216ENST00000476142 RTL9Q8NET4 1388 aa10.4□□□□□ -0.75
CCDC66-216ENST00000476142 GNAT2P19087 354 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 IARSP41252 1262 aaKnown RBP10.39□□□□□ -0.75
CCDC66-216ENST00000476142 KIF23Q02241 960 aaPredicted RBP10.39□□□□□ -0.75
CCDC66-216ENST00000476142 CAVIN4Q5BKX8 364 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 BRAPQ7Z569 592 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 ADGRA1Q86SQ6 560 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 C17orf53Q8N3J3 647 aaPredicted RBP10.39□□□□□ -0.75
CCDC66-216ENST00000476142 CELF1Q92879 486 aaKnown RBP10.39□□□□□ -0.75
CCDC66-216ENST00000476142 SLC26A6Q9BXS9 759 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 KRT23Q9C075 422 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 GNPATO15228 680 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 SNW1Q13573 536 aaKnown RBP10.39□□□□□ -0.75
CCDC66-216ENST00000476142 TRIM29Q14134 588 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 DNTTIP2Q5QJE6 756 aaKnown RBP10.39□□□□□ -0.75
CCDC66-216ENST00000476142 CCDC82Q8N4S0 544 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 LINC00301Q8NCQ3 95 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 SDF4Q9BRK5 362 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
CCDC66-216ENST00000476142 MAGEB6P1A0A0J9YX57 407 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 ERICH2A1L162 156 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 UBAP1LF5GYI3 381 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 UBE2Q2LH0YL09 131 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 SPTLC2O15270 562 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 CTAGE5O15320 804 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 NBPF5PQ86XG9 351 aaPredicted RBP10.38□□□□□ -0.75
CCDC66-216ENST00000476142 KCNG4Q8TDN1 519 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 MINPP1Q9UNW1 487 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 DDX60Q8IY21 1712 aaKnown RBP10.38□□□□□ -0.75
CCDC66-216ENST00000476142 COL4A1P02462 1669 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 GOLGA6L6A8MZA4 724 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 GOLGA6L19H0YKK7 550 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 ZPR1O75312 459 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 MARCKSP29966 332 aaPredicted RBP10.38□□□□□ -0.75
CCDC66-216ENST00000476142 NDUFA8P51970 172 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 SART3Q15020 963 aaKnown RBP10.38□□□□□ -0.75
CCDC66-216ENST00000476142 STX1AQ16623 288 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 KRT40Q6A162 431 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
CCDC66-216ENST00000476142 NUP133Q8WUM0 1156 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 SETDB2Q96T68 719 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 BSDC1Q9NW68 430 aaPredicted RBP10.38□□□□□ -0.75
CCDC66-216ENST00000476142 PNPLA7Q6ZV29 1317 aa10.38□□□□□ -0.75
CCDC66-216ENST00000476142 RANBP6O60518 1105 aaKnown RBP10.37□□□□□ -0.75
CCDC66-216ENST00000476142 SSRP1Q08945 709 aaKnown RBP10.37□□□□□ -0.75
CCDC66-216ENST00000476142 WTAPQ15007 396 aa10.37□□□□□ -0.75
CCDC66-216ENST00000476142 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
CCDC66-216ENST00000476142 ADALQ6DHV7 355 aa10.37□□□□□ -0.75
CCDC66-216ENST00000476142 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
CCDC66-216ENST00000476142 POLR3EQ9NVU0 708 aa10.37□□□□□ -0.75
CCDC66-216ENST00000476142 KLRK1P26718 216 aa10.37□□□□□ -0.75
CCDC66-216ENST00000476142 DYNLL1P63167 89 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms