RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 NTSR2O95665 410 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 VIL1P09327 827 aaKnown RBP8.7□□□□□ -1.02
COL11A1-209ENST00000475980 BMP8BP34820 402 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 PIP4K2AP48426 406 aaPredicted RBP8.7□□□□□ -1.02
COL11A1-209ENST00000475980 CAP1Q01518 475 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 SCARF1Q14162 830 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 LDLRAD1Q5T700 205 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 IL17REQ8NFR9 667 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 NLRP3Q96P20 1036 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 PTCH2Q9Y6C5 1203 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 UBN2Q6ZU65 1347 aa8.7□□□□□ -1.02
COL11A1-209ENST00000475980 WTIPA6NIX2 430 aaPredicted RBP8.69□□□□□ -1.02
COL11A1-209ENST00000475980 SNRPA1P09661 255 aaKnown RBP8.69□□□□□ -1.02
COL11A1-209ENST00000475980 NF2P35240 595 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 CRHR2Q13324 411 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 SLC10A5Q5PT55 438 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 KANK3Q6NY19 840 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 Q7L0L9 218 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 AGBL3Q8NEM8 1001 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 ALPK3Q96L96 1907 aa8.69□□□□□ -1.02
COL11A1-209ENST00000475980 UNCXA6NJT0 531 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
COL11A1-209ENST00000475980 WASHC4Q2M389 1173 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 MORN1Q5T089 497 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 FAM122AQ96E09 287 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 DBNDD1Q9H9R9 158 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 RPTORQ8N122 1335 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 NCOR1O75376 2440 aa8.68□□□□□ -1.02
COL11A1-209ENST00000475980 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 MSTNO14793 375 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 ECE2O60344 883 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 COL1A1P02452 1464 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-209ENST00000475980 TTLL12Q14166 644 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-209ENST00000475980 SUSD4Q5VX71 490 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 OTUD7BQ6GQQ9 843 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 ZNF34Q8IZ26 560 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 ADGRG1Q9Y653 693 aa8.67□□□□□ -1.02
COL11A1-209ENST00000475980 KCNQ3O43525 872 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 GNRH1P01148 92 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 CAPN2P17655 700 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 GJA8P48165 433 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 PRMT2P55345 433 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 GRAPQ13588 217 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 PARP10Q53GL7 1025 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 PPP1R42Q7Z4L9 355 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 GRAPLQ8TC17 118 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-209ENST00000475980 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
COL11A1-209ENST00000475980 GMLQ99445 158 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 GDF15Q99988 308 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 MYOZ2Q9NPC6 264 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 ZSWIM8A7E2V4 1837 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 BDP1A6H8Y1 2624 aa8.66□□□□□ -1.02
COL11A1-209ENST00000475980 SYNGAP1Q96PV0 1343 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-209ENST00000475980 GJB1P08034 283 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 FECHP22830 423 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 FAM109BQ6ICB4 259 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-209ENST00000475980 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 EYA3Q99504 573 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
COL11A1-209ENST00000475980 COL2A1P02458 1487 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-209ENST00000475980 HMOX1P09601 288 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 GPTP24298 496 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 RSBN1LQ6PCB5 846 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-209ENST00000475980 DDX46Q7L014 1031 aaKnown RBP8.64□□□□□ -1.03
COL11A1-209ENST00000475980 SH3TC2Q8TF17 1288 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 WNK4Q96J92 1243 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-209ENST00000475980 CACNA1AO00555 2505 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 ECM29Q5VYK3 1845 aa8.64□□□□□ -1.03
COL11A1-209ENST00000475980 COL4A1P02462 1669 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 OTOFQ9HC10 1997 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 WNT7BP56706 349 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 PRAMEF18Q5VWM3 479 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
COL11A1-209ENST00000475980 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 SLC10A4Q96EP9 437 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 GUCD1Q96NT3 240 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
COL11A1-209ENST00000475980 ARIH1Q9Y4X5 557 aaPredicted RBP8.63□□□□□ -1.03
COL11A1-209ENST00000475980 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
COL11A1-209ENST00000475980 MMP14P50281 582 aa8.62□□□□□ -1.03
COL11A1-209ENST00000475980 MTFR1Q15390 333 aa8.62□□□□□ -1.03
COL11A1-209ENST00000475980 TDHQ8IZJ6 230 aa8.62□□□□□ -1.03
COL11A1-209ENST00000475980 PTPN18Q99952 460 aa8.62□□□□□ -1.03
COL11A1-209ENST00000475980 UTP14AQ9BVJ6 771 aaKnown RBP8.62□□□□□ -1.03
COL11A1-209ENST00000475980 SLC27A5Q9Y2P5 690 aa8.62□□□□□ -1.03
COL11A1-209ENST00000475980 WASF2Q9Y6W5 498 aa8.62□□□□□ -1.03
COL11A1-209ENST00000475980 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-209ENST00000475980 SKOR1P84550 965 aa8.61□□□□□ -1.03
COL11A1-209ENST00000475980 NBPF9Q3BBW0 867 aa8.61□□□□□ -1.03
COL11A1-209ENST00000475980 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms