RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 GIMAP6Q6P9H5 292 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 LEO1Q8WVC0 666 aaPredicted RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 GTF3C6Q969F1 213 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 FAM227BQ96M60 508 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 TMUB1Q9BVT8 246 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 BRIP1Q9BX63 1249 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 BICC1Q9H694 974 aaKnown RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 TTC12Q9H892 705 aaPredicted RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 GOPCQ9HD26 462 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 PYCARDQ9ULZ3 195 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 PA2G4Q9UQ80 394 aaKnown RBP8.09□□□□□ -1.11
UBR4-212ENST00000475973 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
UBR4-212ENST00000475973 SH3TC1Q8TE82 1336 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 PFKFB2O60825 505 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 HSPA6P17066 643 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 FOSBP53539 338 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 GCKRQ14397 625 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 EPHA10Q5JZY3 1008 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 SOGA3Q5TF21 947 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 PRR5LQ6MZQ0 368 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 NAA16Q6N069 864 aaPredicted RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 CLEC4GQ6UXB4 293 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 ZNF589Q86UQ0 364 aaPredicted RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 NBPF5PQ86XG9 351 aaPredicted RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 ENGASEQ8NFI3 743 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 ZNF622Q969S3 477 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBR4-212ENST00000475973 HAUS7Q99871 368 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 REPIN1Q9BWE0 567 aaKnown RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 ZSCAN16Q9H4T2 348 aaPredicted RBP8.08□□□□□ -1.12
UBR4-212ENST00000475973 CBX8Q9HC52 389 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 FAM53CQ9NYF3 392 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 USP16Q9Y5T5 823 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 SPEF2Q9C093 1822 aa8.08□□□□□ -1.12
UBR4-212ENST00000475973 ZNF609O15014 1411 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 PRAMEF22A3QJZ6 481 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 FIBPO43427 364 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 TOMM70O94826 608 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 DDX58O95786 925 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 EIF2S2P20042 333 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 LMNB1P20700 586 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 ZNF75DP51815 510 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 RASSF7Q02833 373 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 CWF19L2Q2TBE0 894 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 BLOC1S2Q6QNY1 142 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 KIF6Q6ZMV9 814 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 NOL8Q76FK4 1167 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 AACSQ86V21 672 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.07□□□□□ -1.12
UBR4-212ENST00000475973 CNKSR1Q969H4 720 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 MRFAP1L1Q96HT8 127 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 NUP62CLQ9H1M0 184 aa8.07□□□□□ -1.12
UBR4-212ENST00000475973 TLR7Q9NYK1 1049 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 MYH14Q7Z406 1995 aaKnown RBP8.07□□□□□ -1.12
UBR4-212ENST00000475973 DDX60Q8IY21 1712 aaKnown RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 NEDD4P46934 1319 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 ANXA1P04083 346 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 ZSCAN20P17040 1043 aaPredicted RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 PIP4K2AP48426 406 aaPredicted RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 G3BP1Q13283 466 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBR4-212ENST00000475973 SNW1Q13573 536 aaKnown RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 STYK1Q6J9G0 422 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 TPTE2Q6XPS3 522 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 NECAB1Q8N987 351 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 ZNF830Q96NB3 372 aaPredicted RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 PHOX2BQ99453 314 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 DSCC1Q9BVC3 393 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 NMRK2Q9NPI5 230 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 C9orf78Q9NZ63 289 aaPredicted RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 DBNLQ9UJU6 430 aaKnown RBP8.06□□□□□ -1.12
UBR4-212ENST00000475973 NIP7Q9Y221 180 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBR4-212ENST00000475973 KIF3AQ9Y496 699 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 NRXN2Q9P2S2 1712 aa8.06□□□□□ -1.12
UBR4-212ENST00000475973 GOLGA6L6A8MZA4 724 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 H7C1W4 665 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 CTAGE5O15320 804 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 NEMFO60524 1076 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 CTDNEP1O95476 244 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 CYP21A2P08686 494 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 HMGB1P09429 215 aaKnown RBP8.05□□□□□ -1.12
UBR4-212ENST00000475973 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
UBR4-212ENST00000475973 KCNJ6P48051 423 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 APLP1P51693 650 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 KBTBD3Q8NAB2 608 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 NSUN7Q8NE18 718 aaKnown RBP8.05□□□□□ -1.12
UBR4-212ENST00000475973 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 319.4 ms