RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 PDE8BO95263 885 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 TNNI2P48788 182 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 HDLBPQ00341 1268 aaKnown RBP9.04□□□□□ -0.96
UBE4B-208ENST00000475795 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-208ENST00000475795 CRHR2Q13324 411 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 GRIK5Q16478 980 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-208ENST00000475795 OTOP1Q7RTM1 612 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 OPTNQ96CV9 577 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 TMEM39BQ9GZU3 492 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 TRIM17Q9Y577 477 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 KIF16BQ96L93 1317 aa9.04□□□□□ -0.96
UBE4B-208ENST00000475795 FRAT2O75474 233 aaPredicted RBP9.03□□□□□ -0.96
UBE4B-208ENST00000475795 FGFR2P21802 821 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 BCAMP50895 628 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 VGLL4Q14135 290 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 PUM3Q15397 648 aaKnown RBP9.03□□□□□ -0.96
UBE4B-208ENST00000475795 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
UBE4B-208ENST00000475795 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.03□□□□□ -0.96
UBE4B-208ENST00000475795 TEKT1Q969V4 418 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 ERO1AQ96HE7 468 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 PTPN18Q99952 460 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 SUGT1Q9Y2Z0 365 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 MAST3O60307 1309 aa9.03□□□□□ -0.96
UBE4B-208ENST00000475795 HTTP42858 3142 aa9.02□□□□□ -0.96
UBE4B-208ENST00000475795 RPAP1Q9BWH6 1393 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-208ENST00000475795 SEC24BO95487 1268 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 RFX5P48382 616 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-208ENST00000475795 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 SLFN5Q08AF3 891 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 ALDH1L2Q3SY69 923 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 CD99L2Q8TCZ2 262 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 BRI3BPQ8WY22 251 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 SLC39A7Q92504 469 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 ZDHHC15Q96MV8 337 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 TMOD2Q9NZR1 351 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 CSADQ9Y600 493 aa9.02□□□□□ -0.97
UBE4B-208ENST00000475795 ZSWIM8A7E2V4 1837 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 CCL15-CCL14A0A0B4J2E2 113 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 EYA2O00167 538 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 IFIT1P09914 478 aaKnown RBP9.01□□□□□ -0.97
UBE4B-208ENST00000475795 SLC5A1P13866 664 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 GTF2A2P52657 109 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 CACNB3P54284 484 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 CAP1Q01518 475 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 SP3Q02447 781 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 CCL15Q16663 113 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 FKBP1CQ5VVH2 108 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 INTS3Q68E01 1043 aaKnown RBP9.01□□□□□ -0.97
UBE4B-208ENST00000475795 APOBEC3HQ6NTF7 200 aaKnown RBP9.01□□□□□ -0.97
UBE4B-208ENST00000475795 HHIPL2Q6UWX4 724 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 FAM83AQ86UY5 434 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 METRNQ9UJH8 293 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 PTPN22Q9Y2R2 807 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 CENPFP49454 3210 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 DOCK2Q92608 1830 aa9.01□□□□□ -0.97
UBE4B-208ENST00000475795 SPDYE5A6NIY4 337 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 TAF1CQ15572 869 aaPredicted RBP9□□□□□ -0.97
UBE4B-208ENST00000475795 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 FAM43AQ8N2R8 423 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 WDR66Q8TBY9 1149 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 LPIN2Q92539 896 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 ARMC5Q96C12 935 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 HOOK2Q96ED9 719 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 OTUD5Q96G74 571 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 WRNIP1Q96S55 665 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 ZFYVE28Q9HCC9 887 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 SMC4Q9NTJ3 1288 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 SNCAIPQ9Y6H5 919 aa9□□□□□ -0.97
UBE4B-208ENST00000475795 POTEFA5A3E0 1075 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 CIAO1O76071 339 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 DCAF15Q66K64 600 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 ERO1BQ86YB8 467 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 TRMT2AQ8IZ69 625 aaKnown RBP8.99□□□□□ -0.97
UBE4B-208ENST00000475795 CDCA7LQ96GN5 454 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 ZCCHC17Q9NP64 241 aaKnown RBP8.99□□□□□ -0.97
UBE4B-208ENST00000475795 PTPRFP10586 1907 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 BRCA2P51587 3418 aa8.99□□□□□ -0.97
UBE4B-208ENST00000475795 MGAMO43451 1857 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 MKI67P46013 3256 aaKnown RBP8.98□□□□□ -0.97
UBE4B-208ENST00000475795 IRF6O14896 467 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 CT47B1P0C2W7 299 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-208ENST00000475795 UBTFL1P0CB47 393 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-208ENST00000475795 C7P10643 843 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 CETPP11597 493 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 PPIL2Q13356 520 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 ARHGEF6Q15052 776 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 ZKSCAN4Q969J2 545 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-208ENST00000475795 ZNF341Q9BYN7 854 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 SIL1Q9H173 461 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 DAGLAQ9Y4D2 1042 aa8.98□□□□□ -0.97
UBE4B-208ENST00000475795 PHIPQ8WWQ0 1821 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms