RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 TK2O00142 265 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 FKBP5Q13451 457 aaPredicted RBP13.31□□□□□ -0.28
CALD1-217ENST00000475772 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
CALD1-217ENST00000475772 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 SPRYD7Q5W111 196 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
CALD1-217ENST00000475772 ARMC9Q7Z3E5 817 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 PRMT6Q96LA8 375 aaPredicted RBP13.31□□□□□ -0.28
CALD1-217ENST00000475772 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 ANGEL1Q9UNK9 670 aaKnown RBP13.31□□□□□ -0.28
CALD1-217ENST00000475772 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
CALD1-217ENST00000475772 SSC5DA1L4H1 1573 aa13.3□□□□□ -0.28
CALD1-217ENST00000475772 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
CALD1-217ENST00000475772 IL1R1P14778 569 aa13.3□□□□□ -0.28
CALD1-217ENST00000475772 NF2P35240 595 aa13.3□□□□□ -0.28
CALD1-217ENST00000475772 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
CALD1-217ENST00000475772 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
CALD1-217ENST00000475772 APOBEC3FQ8IUX4 373 aaKnown RBP13.3□□□□□ -0.28
CALD1-217ENST00000475772 ZNF594Q96JF6 807 aaPredicted RBP13.3□□□□□ -0.28
CALD1-217ENST00000475772 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
CALD1-217ENST00000475772 HTTP42858 3142 aa13.3□□□□□ -0.28
CALD1-217ENST00000475772 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
CALD1-217ENST00000475772 CLMNQ96JQ2 1002 aa13.29□□□□□ -0.28
CALD1-217ENST00000475772 VPS9D1Q9Y2B5 631 aa13.29□□□□□ -0.28
CALD1-217ENST00000475772 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
CALD1-217ENST00000475772 LAMB1P07942 1786 aa13.29□□□□□ -0.28
CALD1-217ENST00000475772 KIAA0100Q14667 2235 aaKnown RBP13.29□□□□□ -0.28
CALD1-217ENST00000475772 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
CALD1-217ENST00000475772 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
CALD1-217ENST00000475772 USP2O75604 605 aaPredicted RBP13.28□□□□□ -0.28
CALD1-217ENST00000475772 KCNJ4P48050 445 aa13.28□□□□□ -0.28
CALD1-217ENST00000475772 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
CALD1-217ENST00000475772 CFAP100Q494V2 611 aa13.28□□□□□ -0.28
CALD1-217ENST00000475772 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
CALD1-217ENST00000475772 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
CALD1-217ENST00000475772 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
CALD1-217ENST00000475772 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
CALD1-217ENST00000475772 BRCA2P51587 3418 aa13.27□□□□□ -0.28
CALD1-217ENST00000475772 CLRN2A0PK11 232 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 IGF2BP3O00425 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
CALD1-217ENST00000475772 FKTNO75072 461 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 GJA5P36382 358 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 FKBP1AP62942 108 aaKnown RBP13.27□□□□□ -0.29
CALD1-217ENST00000475772 SREBF2Q12772 1141 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 PTGDRQ13258 359 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 IFIT5Q13325 482 aaKnown RBP13.27□□□□□ -0.29
CALD1-217ENST00000475772 PROX2Q3B8N5 592 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 FBXO46Q6PJ61 603 aaPredicted RBP13.27□□□□□ -0.29
CALD1-217ENST00000475772 SLC10A4Q96EP9 437 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
CALD1-217ENST00000475772 COL1A1P02452 1464 aaPredicted RBP13.26□□□□□ -0.29
CALD1-217ENST00000475772 CAP1Q01518 475 aa13.26□□□□□ -0.29
CALD1-217ENST00000475772 TDRD7Q8NHU6 1098 aaKnown RBP13.26□□□□□ -0.29
CALD1-217ENST00000475772 WNK4Q96J92 1243 aa13.26□□□□□ -0.29
CALD1-217ENST00000475772 PUS3Q9BZE2 481 aaKnown RBP13.26□□□□□ -0.29
CALD1-217ENST00000475772 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 MANSC4A6NHS7 340 aaPredicted RBP13.25□□□□□ -0.29
CALD1-217ENST00000475772 HRO43593 1189 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 PLIN1O60240 522 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 INHBEP58166 350 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 LDHAL6AQ6ZMR3 332 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 PTPN18Q99952 460 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
CALD1-217ENST00000475772 GRM8O00222 908 aa13.24□□□□□ -0.29
CALD1-217ENST00000475772 ZBTB48P10074 688 aaPredicted RBP13.24□□□□□ -0.29
CALD1-217ENST00000475772 PRSS12P56730 875 aa13.24□□□□□ -0.29
CALD1-217ENST00000475772 RASA3Q14644 834 aa13.24□□□□□ -0.29
CALD1-217ENST00000475772 GRIK5Q16478 980 aa13.24□□□□□ -0.29
CALD1-217ENST00000475772 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
CALD1-217ENST00000475772 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
CALD1-217ENST00000475772 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
CALD1-217ENST00000475772 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 UNCXA6NJT0 531 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 GPR37O15354 613 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 PPP1R12BO60237 982 aaPredicted RBP13.23□□□□□ -0.29
CALD1-217ENST00000475772 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 GYG1P46976 350 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 CCDC57Q2TAC2 916 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 SUPT20HL1Q3ZLR7 823 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
CALD1-217ENST00000475772 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 TDRD3Q9H7E2 651 aaKnown RBP13.23□□□□□ -0.29
CALD1-217ENST00000475772 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
CALD1-217ENST00000475772 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
CALD1-217ENST00000475772 TRIM6-TRIM34B2RNG4 842 aa13.22□□□□□ -0.29
CALD1-217ENST00000475772 BHMG1C9JSJ3 638 aaPredicted RBP13.22□□□□□ -0.29
CALD1-217ENST00000475772 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
CALD1-217ENST00000475772 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
CALD1-217ENST00000475772 RIPOR2Q9Y4F9 1068 aa13.22□□□□□ -0.29
CALD1-217ENST00000475772 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
CALD1-217ENST00000475772 MYO1BO43795 1136 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms