RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
TUBA4A-209ENST00000475683 IQSEC3Q9UPP2 1182 aaPredicted RBP16.58■□□□□ 0.24
TUBA4A-209ENST00000475683 UNCXA6NJT0 531 aa16.57■□□□□ 0.24
TUBA4A-209ENST00000475683 CACNB3P54284 484 aa16.57■□□□□ 0.24
TUBA4A-209ENST00000475683 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
TUBA4A-209ENST00000475683 VGLL4Q14135 290 aa16.57■□□□□ 0.24
TUBA4A-209ENST00000475683 HABP4Q5JVS0 413 aaKnown RBP16.57■□□□□ 0.24
TUBA4A-209ENST00000475683 ARMC5Q96C12 935 aa16.57■□□□□ 0.24
TUBA4A-209ENST00000475683 CRKP46108 304 aa16.56■□□□□ 0.24
TUBA4A-209ENST00000475683 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
TUBA4A-209ENST00000475683 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
TUBA4A-209ENST00000475683 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
TUBA4A-209ENST00000475683 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
TUBA4A-209ENST00000475683 AK9Q5TCS8 1911 aa16.56■□□□□ 0.24
TUBA4A-209ENST00000475683 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 UBE4AQ14139 1066 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 TAF1CQ15572 869 aaPredicted RBP16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 OTUD7BQ6GQQ9 843 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 OTUD5Q96G74 571 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 CCDC136Q96JN2 1154 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 SIL1Q9H173 461 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 DCTPP1Q9H773 170 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 COPRSQ9NQ92 184 aa16.55■□□□□ 0.24
TUBA4A-209ENST00000475683 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 HMMRO75330 724 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 CCL15Q16663 113 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 ZNF333Q96JL9 665 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 CEP290O15078 2479 aa16.54■□□□□ 0.24
TUBA4A-209ENST00000475683 MYCP01106 439 aaPredicted RBP16.53■□□□□ 0.24
TUBA4A-209ENST00000475683 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
TUBA4A-209ENST00000475683 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.24
TUBA4A-209ENST00000475683 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
TUBA4A-209ENST00000475683 SNCAIPQ9Y6H5 919 aa16.52■□□□□ 0.24
TUBA4A-209ENST00000475683 MGAMO43451 1857 aa16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 EYA2O00167 538 aa16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 APBB1O00213 710 aa16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 G3BP1Q13283 466 aaKnown RBP eCLIP16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 ZKSCAN4Q969J2 545 aaPredicted RBP16.51■□□□□ 0.23
TUBA4A-209ENST00000475683 SPDYE5A6NIY4 337 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 SMARCA5O60264 1052 aaPredicted RBP16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 GTF2A2P52657 109 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 SLC9C1Q4G0N8 1177 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 ZFYVE28Q9HCC9 887 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 CSADQ9Y600 493 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 SZT2Q5T011 3432 aa16.5■□□□□ 0.23
TUBA4A-209ENST00000475683 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
TUBA4A-209ENST00000475683 TNNI2P48788 182 aa16.49■□□□□ 0.23
TUBA4A-209ENST00000475683 BCAMP50895 628 aa16.49■□□□□ 0.23
TUBA4A-209ENST00000475683 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
TUBA4A-209ENST00000475683 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
TUBA4A-209ENST00000475683 MROH5Q6ZUA9 1318 aa16.48■□□□□ 0.23
TUBA4A-209ENST00000475683 IRF6O14896 467 aa16.48■□□□□ 0.23
TUBA4A-209ENST00000475683 CIAO1O76071 339 aa16.48■□□□□ 0.23
TUBA4A-209ENST00000475683 CTGFP29279 349 aa16.48■□□□□ 0.23
TUBA4A-209ENST00000475683 TFCP2Q12800 502 aa16.48■□□□□ 0.23
TUBA4A-209ENST00000475683 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
TUBA4A-209ENST00000475683 DOCK2Q92608 1830 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 TLR2O60603 784 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 TEKT1Q969V4 418 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 COLQQ9Y215 455 aaPredicted RBP16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 PTPRFP10586 1907 aa16.47■□□□□ 0.23
TUBA4A-209ENST00000475683 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 INPP5BP32019 993 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 LACTBP83111 547 aaPredicted RBP16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 SKAP1Q86WV1 359 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 ZDHHC15Q96MV8 337 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 MYH2Q9UKX2 1941 aa16.46■□□□□ 0.23
TUBA4A-209ENST00000475683 PDE8BO95263 885 aa16.45■□□□□ 0.22
TUBA4A-209ENST00000475683 CETPP11597 493 aa16.45■□□□□ 0.22
TUBA4A-209ENST00000475683 HDLBPQ00341 1268 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms