RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
UBXN11-214ENST00000475591 LTBP4Q8N2S1 1624 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 DOCK2Q92608 1830 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 GYG1P46976 350 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 MYSM1Q5VVJ2 828 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 ADGRA1Q86SQ6 560 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 ZSWIM5Q9P217 1185 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 TAF1P21675 1872 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 SMIM22K7EJ46 135 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
UBXN11-214ENST00000475591 ALX1Q15699 326 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
UBXN11-214ENST00000475591 ATL3Q6DD88 541 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 BARGINQ6ZT62 677 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 LRP2BPQ9P2M1 347 aa16.43■□□□□ 0.22
UBXN11-214ENST00000475591 FAM160A1Q05DH4 1040 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 STK38Q15208 465 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 FBXW7Q969H0 707 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
UBXN11-214ENST00000475591 SLC4A4Q9Y6R1 1079 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
UBXN11-214ENST00000475591 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
UBXN11-214ENST00000475591 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
UBXN11-214ENST00000475591 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 ZBTB43O43298 467 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 TDO2P48775 406 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 NDUFA8P51970 172 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 TOMM22Q9NS69 142 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
UBXN11-214ENST00000475591 CCDC24Q8N4L8 307 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
UBXN11-214ENST00000475591 MRPS27Q92552 414 aaKnown RBP16.41■□□□□ 0.22
UBXN11-214ENST00000475591 TMEM87BQ96K49 555 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 PYCARDQ9ULZ3 195 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 ZNF652Q9Y2D9 606 aa16.41■□□□□ 0.22
UBXN11-214ENST00000475591 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
UBXN11-214ENST00000475591 NTRK3Q16288 839 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 FMR1NBQ8N0W7 255 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-214ENST00000475591 SDR42E1Q8WUS8 393 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 PIBF1Q8WXW3 757 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 SMARCC1Q92922 1105 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-214ENST00000475591 COL1A1P02452 1464 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-214ENST00000475591 COL5A3P25940 1745 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-214ENST00000475591 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 KRT40Q6A162 431 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 NRBP1Q9UHY1 535 aa16.4■□□□□ 0.22
UBXN11-214ENST00000475591 LAMB2P55268 1798 aa16.39■□□□□ 0.22
UBXN11-214ENST00000475591 SPTLC2O15270 562 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 CYP7A1P22680 504 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 PTGS1P23219 599 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 IQCB1Q15051 598 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 BRAPQ7Z569 592 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
UBXN11-214ENST00000475591 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
UBXN11-214ENST00000475591 TRIM5Q9C035 493 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-214ENST00000475591 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBXN11-214ENST00000475591 FAM182BQ5T319 152 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 MFSD6Q6ZSS7 791 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 SGMS1Q86VZ5 419 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
UBXN11-214ENST00000475591 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
UBXN11-214ENST00000475591 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 KLRK1P26718 216 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 ZNF75DP51815 510 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
UBXN11-214ENST00000475591 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 SLC12A7Q9Y666 1083 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 CICQ96RK0 1608 aaPredicted RBP16.38■□□□□ 0.21
UBXN11-214ENST00000475591 CCDC69A6NI79 296 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 CTAGE5O15320 804 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 YEATS4O95619 227 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 GUCY1A2P33402 732 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 STX1AQ16623 288 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 PLA2G4DQ86XP0 818 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 CCDC82Q8N4S0 544 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 SLC26A6Q9BXS9 759 aa16.38■□□□□ 0.21
UBXN11-214ENST00000475591 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
UBXN11-214ENST00000475591 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
UBXN11-214ENST00000475591 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
UBXN11-214ENST00000475591 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
UBXN11-214ENST00000475591 TPM2P07951 284 aa16.37■□□□□ 0.21
UBXN11-214ENST00000475591 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
UBXN11-214ENST00000475591 CLEC4GQ6UXB4 293 aa16.37■□□□□ 0.21
UBXN11-214ENST00000475591 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
UBXN11-214ENST00000475591 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms