RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 LLPHQ9BRT6 129 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 NRXN2Q9P2S2 1712 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 RGPD3A6NKT7 1758 aaPredicted RBP11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 RGPD4Q7Z3J3 1758 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 KLF18A0A0U1RQI7 1052 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 CTDNEP1O95476 244 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 PDE6BP35913 854 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 AKNAD1Q5T1N1 836 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 SMARCC2Q8TAQ2 1214 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 DDX11Q96FC9 970 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 ATP6V0A2Q9Y487 856 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
SPTAN1-206ENST00000475367 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 LDHBP07195 334 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 MFSD6Q6ZSS7 791 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 CD209Q9NNX6 404 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 STK32BQ9NY57 414 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 MINDY4BA8MYZ0 360 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 SH2B2O14492 632 aaPredicted RBP11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 PPARAQ07869 468 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 GRIK5Q16478 980 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 KLHL40Q2TBA0 621 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 STK11IPQ8N1F8 1099 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 STAG1Q8WVM7 1258 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 KRT23Q9C075 422 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
SPTAN1-206ENST00000475367 PTPDC1A2A3K4 754 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 KDM4AO75164 1064 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 IL1R1P14778 569 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 NCLP19338 710 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 CDC37L1Q7L3B6 337 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 CHMP4CQ96CF2 233 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 ANGEL1Q9UNK9 670 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 ATP6V1DQ9Y5K8 247 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 CYP2D7A0A087X1C5 515 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 FAM184AQ8NB25 1140 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 IGDCC4Q8TDY8 1250 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 TMEM87BQ96K49 555 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 CRNKL1Q9BZJ0 848 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 SENP2Q9HC62 589 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 GDPD2Q9HCC8 539 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 TOMM22Q9NS69 142 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 ANAPC4Q9UJX5 808 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 CNPY2Q9Y2B0 182 aa11.54□□□□□ -0.56
SPTAN1-206ENST00000475367 TIAM2Q8IVF5 1701 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 SMIM22K7EJ46 135 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 HMGN5P82970 282 aaKnown RBP11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 TMEM67Q5HYA8 995 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 USP48Q86UV5 1035 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 FERMT3Q86UX7 667 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 C2CD5Q86YS7 1000 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 RNF41Q9H4P4 317 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-206ENST00000475367 LRRC37AA6NMS7 1700 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 IFIT3O14879 490 aaKnown RBP11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 RIMBP2O15034 1052 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 PPFIA3O75145 1194 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 GSTO1P78417 241 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 CTR9Q6PD62 1173 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 MPNDQ8N594 471 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 LY9Q9HBG7 655 aa11.52□□□□□ -0.56
SPTAN1-206ENST00000475367 MAST2Q6P0Q8 1798 aa11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 IGSF3O75054 1194 aa11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 FOSBP53539 338 aa11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 DNM1Q05193 864 aaKnown RBP11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 DIXDC1Q155Q3 683 aa11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 NFXL1Q6ZNB6 911 aa11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 CHD4Q14839 1912 aa11.52□□□□□ -0.57
SPTAN1-206ENST00000475367 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 USP17L21D6R901 530 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 H3BQV1 296 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 DHX16O60231 1041 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 GADD45BO75293 160 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 DCP1AQ9NPI6 582 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 ATP8A2Q9NTI2 1148 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 KIF3AQ9Y496 699 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 COL11A2P13942 1736 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 H0YIN7 160 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 LDHCP07864 332 aa11.51□□□□□ -0.57
SPTAN1-206ENST00000475367 SF3B2Q13435 895 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms