RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-211	ENST00000475315	SKIDA1	Q1XH10	827 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	GBP6	Q6ZN66	633 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	STOX1	Q6ZVD7	989 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	CTAGE6	Q86UF2	777 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	CTAGE4	Q8IX94	777 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	MIEF2	Q96C03	454 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	EAF2	Q96CJ1	260 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	JPH2	Q9BR39	696 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	PA2G4	Q9UQ80	394 aa	Known RBP	13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	KDR	P35968	1356 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	CEMIP	Q8WUJ3	1361 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	GRIN2D	O15399	1336 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	KIF5C	O60282	957 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	FDPS	P14324	419 aa	Known RBP	13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	MAP9	Q49MG5	647 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	ZNF569	Q5MCW4	686 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	RIN2	Q8WYP3	895 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	SMARCC1	Q92922	1105 aa	Predicted RBP	13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	FAXDC2	Q96IV6	333 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	CABS1	Q96KC9	395 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	RAI14	Q9P0K7	980 aa		13.42	□□□□□ -0.26
FXR1-211	ENST00000475315	CTAGE9	A4FU28	777 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	AGPS	O00116	658 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	SASH1	O94885	1247 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	ZNF18	P17022	549 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	PIP4K2B	P78356	416 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	KIF4B	Q2VIQ3	1234 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	PANX2	Q96RD6	677 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	HPSE	Q9Y251	543 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	MLH3	Q9UHC1	1453 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	OVOS2	A0A0J9YW53	1432 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	OVOS2	Q6IE36	1432 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	WASL	O00401	505 aa	Predicted RBP	13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	ELF1	P32519	619 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	AMPD2	Q01433	879 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	PDE4B	Q07343	736 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	SLC35F6	Q8N357	371 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	EHD4	Q9H223	541 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	NCOA5	Q9HCD5	579 aa	Known RBP	13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	TLR7	Q9NYK1	1049 aa	Known RBP	13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	TSPOAP1	O95153	1857 aa		13.41	□□□□□ -0.26
FXR1-211	ENST00000475315	FSBP	O95073	299 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	BMP6	P22004	513 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	CDC27	P30260	824 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	CCT2	P78371	535 aa	Known RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	EXOSC10	Q01780	885 aa	Known RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	NEDD9	Q14511	834 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	TAF7	Q15545	349 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	RASGRP2	Q7LDG7	609 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	AMOTL1	Q8IY63	956 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	COG1	Q8WTW3	980 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	BOLA2	Q9H3K6	86 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315		U3KPZ7	1027 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	GGCX	P38435	758 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	PPFIA1	Q13136	1202 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	PNOC	Q13519	176 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	PREPL	Q4J6C6	727 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	MYSM1	Q5VVJ2	828 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	DHX32	Q7L7V1	743 aa	Known RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	FAM76A	Q8TAV0	307 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	TBC1D22A	Q8WUA7	517 aa		13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.4	□□□□□ -0.26
FXR1-211	ENST00000475315	NCKAP5L	Q9HCH0	1330 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	FAM237A	A0A1B0GTK4	181 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	EIF3H	O15372	352 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	AMPH	P49418	695 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	USP14	P54578	494 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	STIM1	Q13586	685 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	C11orf91	Q3C1V1	193 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	HSP90AB3P	Q58FF7	597 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	HDGFL1	Q5TGJ6	251 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	LRCH2	Q5VUJ6	765 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	OLFM4	Q6UX06	510 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	GIMAP7	Q8NHV1	300 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	NAPG	Q99747	312 aa	Predicted RBP	13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	CAPN7	Q9Y6W3	813 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	MYO1F	O00160	1098 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	PPFIA3	O75145	1194 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	SYK	P43405	635 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	SET	Q01105	290 aa	Predicted RBP	13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	NR1I3	Q14994	352 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	PPP2R5A	Q15172	486 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	BCAS4	Q8TDM0	211 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	NUDT16	Q96DE0	195 aa	Known RBP	13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	SGSM3	Q96HU1	749 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	NAA15	Q9BXJ9	866 aa	Known RBP	13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	ZNF609	O15014	1411 aa		13.39	□□□□□ -0.27
FXR1-211	ENST00000475315	MYH8	P13535	1937 aa		13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	CHUK	O15111	745 aa		13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	POLR3D	P05423	398 aa	Predicted RBP	13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	HMGB1	P09429	215 aa	Known RBP	13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	PDIA3	P30101	505 aa	Known RBP	13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	WLS	Q5T9L3	541 aa		13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	ANO1	Q5XXA6	986 aa		13.38	□□□□□ -0.27
FXR1-211	ENST00000475315	OTUD7B	Q6GQQ9	843 aa		13.38	□□□□□ -0.27

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