RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 SLC39A14Q15043 492 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 DDX17Q92841 729 aaKnown RBP15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 DHX58Q96C10 678 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 LZTFL1Q9NQ48 299 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 PUF60Q9UHX1 559 aaKnown RBP15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 PHLPP2Q6ZVD8 1323 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 COBLO75128 1261 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 ZAP70P43403 619 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 KRT40Q6A162 431 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 KRBA2Q6ZNG9 492 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 CNNM3Q8NE01 707 aa15.79■□□□□ 0.12
SEMA4D-217ENST00000475255 ABCC6O95255 1503 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 A1BGP04217 495 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 PPP2R3AQ06190 1150 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 FMR1Q06787 632 aaKnown RBP eCLIP15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 SKIDA1Q1XH10 827 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 CC2D1AQ6P1N0 951 aaPredicted RBP15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 TMEM139Q8IV31 216 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 MB21D2Q8IYB1 491 aaPredicted RBP15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 BAG1Q99933 345 aaPredicted RBP15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 PARD6BQ9BYG5 372 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 LMO7Q8WWI1 1683 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 MRC1P22897 1456 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 SMC1AQ14683 1233 aaKnown RBP15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
SEMA4D-217ENST00000475255 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 PHKG2P15735 406 aa15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 CHRNA2Q15822 529 aa15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 TTC39AQ5SRH9 613 aa15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
SEMA4D-217ENST00000475255 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.11
SEMA4D-217ENST00000475255 WWC2Q6AWC2 1192 aa15.77■□□□□ 0.11
SEMA4D-217ENST00000475255 CYB5R4Q7L1T6 521 aa15.77■□□□□ 0.11
SEMA4D-217ENST00000475255 BRAPQ7Z569 592 aa15.77■□□□□ 0.11
SEMA4D-217ENST00000475255 CERS3Q8IU89 383 aa15.77■□□□□ 0.11
SEMA4D-217ENST00000475255 EFCAB8A8MWE9 144 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 EYA2O00167 538 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 ZNF213O14771 459 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 IKBKBO14920 756 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 MRPL44Q9H9J2 332 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 MCM6Q14566 821 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 NCOA7Q8NI08 942 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 CCDC12Q8WUD4 166 aaPredicted RBP15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 KCNH3Q9ULD8 1083 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 NFE2L3Q9Y4A8 694 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 B4E1Z4 1266 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 GPAA1O43292 621 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 DHX16O60231 1041 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 CASP1P29466 404 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 KLHL10Q6JEL2 608 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 XAGE2Q96GT9 111 aa15.76■□□□□ 0.11
SEMA4D-217ENST00000475255 C5P01031 1676 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 SOWAHDA6NJG2 315 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 IL15P40933 162 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 TNNT3P45378 269 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 LMAN1P49257 510 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 STX17P56962 302 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 PTPAQ15257 358 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 TBC1D10CQ8IV04 446 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 CEP126Q9P2H0 1117 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 LCMT1Q9UIC8 334 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 KCNJ14Q9UNX9 436 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 H3BQF6 201 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 TRIM66O15016 1216 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 CYP27B1O15528 508 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 NBPF3Q9H094 633 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 SEC31BQ9NQW1 1179 aa15.75■□□□□ 0.11
SEMA4D-217ENST00000475255 RFX7Q2KHR2 1363 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 ZSCAN12O43309 604 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 CBFA2T2O43439 604 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 TC2NQ8N9U0 490 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 CCDC158Q5M9N0 1113 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 ARFGAP3Q9NP61 516 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 HPSEQ9Y251 543 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 H7C1W4 665 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 MAP3K9P80192 1104 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 C10orf67Q8IYJ2 551 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
SEMA4D-217ENST00000475255 BTBD18B2RXH4 712 aa15.73■□□□□ 0.11
SEMA4D-217ENST00000475255 POLR2DO15514 142 aaKnown RBP15.73■□□□□ 0.11
SEMA4D-217ENST00000475255 TEX33O43247 280 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms