RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 ADAMTS12P58397 1594 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 C9orf172C9J069 976 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 ENC1O14682 589 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 PAGE1O75459 146 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 ITGB2P05107 769 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 MAOBP27338 520 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 MBTPS1Q14703 1052 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.19□□□□□ -1.1
SRRM1-210ENST00000474843 STK35Q8TDR2 534 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 NECAB3Q96P71 396 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-210ENST00000474843 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 BCL11AQ9H165 835 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 GRIN2AQ12879 1464 aa8.19□□□□□ -1.1
SRRM1-210ENST00000474843 DLGAP3O95886 979 aa8.18□□□□□ -1.1
SRRM1-210ENST00000474843 POU4F3Q15319 338 aa8.18□□□□□ -1.1
SRRM1-210ENST00000474843 CCDC85BQ15834 202 aaPredicted RBP8.18□□□□□ -1.1
SRRM1-210ENST00000474843 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
SRRM1-210ENST00000474843 SULF2Q8IWU5 870 aa8.18□□□□□ -1.1
SRRM1-210ENST00000474843 DDX54Q8TDD1 881 aaKnown RBP8.18□□□□□ -1.1
SRRM1-210ENST00000474843 MRRFQ96E11 262 aaKnown RBP8.18□□□□□ -1.1
SRRM1-210ENST00000474843 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
SRRM1-210ENST00000474843 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
SRRM1-210ENST00000474843 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-210ENST00000474843 NOS3P29474 1203 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 IREB2P48200 963 aaKnown RBP8.17□□□□□ -1.1
SRRM1-210ENST00000474843 NRG1Q02297 640 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-210ENST00000474843 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 TSNAXIP1Q2TAA8 658 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 AKTIPQ9H8T0 292 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 CBX8Q9HC52 389 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
SRRM1-210ENST00000474843 F6X3S4 739 aa8.16□□□□□ -1.1
SRRM1-210ENST00000474843 ADAM23O75077 832 aa8.16□□□□□ -1.1
SRRM1-210ENST00000474843 CYP11A1P05108 521 aa8.16□□□□□ -1.1
SRRM1-210ENST00000474843 RBM25P49756 843 aaKnown RBP8.16□□□□□ -1.1
SRRM1-210ENST00000474843 AP3B2Q13367 1082 aa8.16□□□□□ -1.1
SRRM1-210ENST00000474843 PDE3AQ14432 1141 aa8.16□□□□□ -1.1
SRRM1-210ENST00000474843 TAF1CQ15572 869 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-210ENST00000474843 WFDC12Q8WWY7 111 aa8.16□□□□□ -1.1
SRRM1-210ENST00000474843 KIF21BO75037 1637 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 RECKO95980 971 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 GLB1P16278 677 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 ITGAEP38570 1179 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 PCNX4Q63HM2 1172 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 KCNB2Q92953 911 aa8.15□□□□□ -1.1
SRRM1-210ENST00000474843 NUP160Q12769 1436 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
SRRM1-210ENST00000474843 NME2P22392 152 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 RASIP1Q5U651 963 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 SV2BQ7L1I2 683 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 GRIN3AQ8TCU5 1115 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 ANKRD24Q8TF21 1146 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 MEGF10Q96KG7 1140 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 RNF208Q9H0X6 261 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 KIAA1522Q9P206 1035 aaPredicted RBP8.14□□□□□ -1.11
SRRM1-210ENST00000474843 CTTNBP2Q8WZ74 1663 aa8.14□□□□□ -1.11
SRRM1-210ENST00000474843 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 LIG1P18858 919 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 GATA4P43694 442 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 MAP1SQ66K74 1059 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-210ENST00000474843 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 TMEM130Q8N3G9 435 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
SRRM1-210ENST00000474843 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
SRRM1-210ENST00000474843 PROCP04070 461 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 BMP6P22004 513 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 ARNTP27540 789 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
SRRM1-210ENST00000474843 TTBK2Q6IQ55 1244 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 PDZD3Q86UT5 571 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 CEP170Q5SW79 1584 aa8.12□□□□□ -1.11
SRRM1-210ENST00000474843 LIG3P49916 1009 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 NUTM2GQ5VZR2 741 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 WDR89Q96FK6 387 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-210ENST00000474843 TMPRSS13Q9BYE2 586 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 RAD18Q9NS91 495 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 SAMM50Q9Y512 469 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
SRRM1-210ENST00000474843 CLASP1Q7Z460 1538 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-210ENST00000474843 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-210ENST00000474843 PREPP48147 710 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 AKAP4Q5JQC9 854 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
SRRM1-210ENST00000474843 LLGL2Q6P1M3 1020 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 ACSBG1Q96GR2 724 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 WDR18Q9BV38 432 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 AP4E1Q9UPM8 1137 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 TLR6Q9Y2C9 796 aa8.1□□□□□ -1.11
SRRM1-210ENST00000474843 ZNF862O60290 1169 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms