RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ADALQ6DHV7 355 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 POTEHQ6S545 545 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 SRGAP1Q7Z6B7 1085 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 EIF1ADQ8N9N8 165 aaKnown RBP4.76□□□□□ -1.65
USP16-205ENST00000474835 OR8K1Q8NGG5 319 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 SEC14L1Q92503 715 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 CAVIN3Q969G5 261 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 ITFG2Q969R8 447 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 TXLNGYQ9BZA5 131 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 LRRCC1Q9C099 1032 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 NBPF3Q9H094 633 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 MRPL44Q9H9J2 332 aaKnown RBP4.76□□□□□ -1.65
USP16-205ENST00000474835 NENFQ9UMX5 172 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 IQSEC3Q9UPP2 1182 aaPredicted RBP4.76□□□□□ -1.65
USP16-205ENST00000474835 ATP6V1DQ9Y5K8 247 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 GPR75-ASB3A0A0A6YYF3 556 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 RASSF10A6NK89 507 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 U2AF1L5P0DN76 240 aaPredicted RBP4.76□□□□□ -1.65
USP16-205ENST00000474835 CASTP20810 708 aaKnown RBP4.76□□□□□ -1.65
USP16-205ENST00000474835 ECHS1P30084 290 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 ZNF165P49910 485 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 NLRP12P59046 1061 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 U2AF1Q01081 240 aaKnown RBP eCLIP4.76□□□□□ -1.65
USP16-205ENST00000474835 CUL4BQ13620 913 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 EIF4A2Q14240 407 aaKnown RBP4.76□□□□□ -1.65
USP16-205ENST00000474835 ARHGAP29Q52LW3 1261 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 STOX1Q6ZVD7 989 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 OLIG1Q8TAK6 271 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 NCSTNQ92542 709 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 CHMP4CQ96CF2 233 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 POLR3GLQ9BT43 218 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 DNAJC25Q9H1X3 360 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 HPS5Q9UPZ3 1129 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 ASB3Q9Y575 518 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 LMOD3Q0VAK6 560 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 XRCC4Q13426 336 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 DRP2Q13474 957 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 RIPK1Q13546 671 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 LINC00301Q8NCQ3 95 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 KIAA1468Q9P260 1216 aa4.76□□□□□ -1.65
USP16-205ENST00000474835 TNS2Q63HR2 1409 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 TAF5LO75529 589 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 CDC27P30260 824 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ALDH1B1P30837 517 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 SMTNP53814 917 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 EIF5P55010 431 aaKnown RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 MEA1Q16626 185 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 TBC1D25Q3MII6 688 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 CREB3L3Q68CJ9 461 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 LARP1Q6PKG0 1096 aaKnown RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 L3MBTL3Q96JM7 780 aaPredicted RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 TMEM59LQ9UK28 342 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 PPP2R2CQ9Y2T4 447 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ABCC12Q96J65 1359 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 LOC285556D6RIA3 1793 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ZMYM6O95789 1325 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 CRYMQ14894 314 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 DPCR1Q3MIW9 517 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 CPLX2Q6PUV4 134 aaKnown RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.75□□□□□ -1.65
USP16-205ENST00000474835 MNS1Q8NEH6 495 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 XPO4Q9C0E2 1151 aaKnown RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 MYO1AQ9UBC5 1043 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 MAP3K19Q56UN5 1328 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 A0A0U1RQJ8 604 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 SEMA3EO15041 775 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ARHGAP6O43182 974 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 YEATS4O95619 227 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 TUBBP07437 444 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 SLC8A3P57103 927 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 MCCD1P59942 119 aaPredicted RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 CREB5Q02930 508 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 SPRED3Q2MJR0 410 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 RABL6Q3YEC7 729 aaPredicted RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 CCDC191Q8NCU4 936 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ATRIPQ8WXE1 791 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ACSBG1Q96GR2 724 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 VCPKMTQ9H867 229 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 ADGRG1Q9Y653 693 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 RPS6KL1Q9Y6S9 549 aa4.75□□□□□ -1.65
USP16-205ENST00000474835 U3KPZ7 1027 aaPredicted RBP4.75□□□□□ -1.65
USP16-205ENST00000474835 EIF3HO15372 352 aaKnown RBP eCLIP4.74□□□□□ -1.65
USP16-205ENST00000474835 SRGAP3O43295 1099 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 PRPF3O43395 683 aaKnown RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 DSG3P32926 999 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 CDK17Q00537 523 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SCRN1Q12765 414 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 MORC3Q14149 939 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 RESP18Q5W5W9 173 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 CERS3Q8IU89 383 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SHISA4Q96DD7 197 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 C19orf44Q9H6X5 657 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 HMG20BQ9P0W2 317 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SLC12A6Q9UHW9 1150 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SH3BP1Q9Y3L3 701 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 STRCQ7RTU9 1775 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 LRRC37AA6NMS7 1700 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 FAM83GA6ND36 823 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 PRLRP16471 622 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 VSNL1P62760 191 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms