RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 COL1A1P02452 1464 aaPredicted RBP25.5■■□□□ 1.67
CCM2-206ENST00000474617 PLSCR1O15162 318 aa25.49■■□□□ 1.67
CCM2-206ENST00000474617 WDR66Q8TBY9 1149 aa25.49■■□□□ 1.67
CCM2-206ENST00000474617 NAP1L2Q9ULW6 460 aaPredicted RBP25.49■■□□□ 1.67
CCM2-206ENST00000474617 IRS2Q9Y4H2 1338 aa25.49■■□□□ 1.67
CCM2-206ENST00000474617 BBOX1O75936 387 aa25.48■■□□□ 1.67
CCM2-206ENST00000474617 ZNF396Q96N95 335 aaPredicted RBP25.48■■□□□ 1.67
CCM2-206ENST00000474617 TAF1P21675 1872 aa25.48■■□□□ 1.67
CCM2-206ENST00000474617 KIAA1551Q9HCM1 1747 aa25.48■■□□□ 1.67
CCM2-206ENST00000474617 HOXA10P31260 410 aaPredicted RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 CCT2P78371 535 aaKnown RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 PPP2R5BQ15173 497 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 FOXD4L6Q3SYB3 417 aaPredicted RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 FOXD4L3Q6VB84 417 aaPredicted RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 SMIM5Q71RC9 77 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 CHST3Q7LGC8 479 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 CHAMP1Q96JM3 812 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 RIOK1Q9BRS2 568 aaKnown RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 GDPD2Q9HCC8 539 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 GADD45BO75293 160 aaPredicted RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 SERPINB2P05120 415 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 NASPP49321 788 aaPredicted RBP25.47■■□□□ 1.67
CCM2-206ENST00000474617 SYNE3Q6ZMZ3 975 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 ZNF804AQ7Z570 1209 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 DDX11Q96FC9 970 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 BRPF3Q9ULD4 1205 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 HPS5Q9UPZ3 1129 aa25.47■■□□□ 1.67
CCM2-206ENST00000474617 ERICH2A1L162 156 aa25.46■■□□□ 1.67
CCM2-206ENST00000474617 KLRG2A4D1S0 409 aaPredicted RBP25.46■■□□□ 1.67
CCM2-206ENST00000474617 ATP2B4P23634 1241 aa25.46■■□□□ 1.67
CCM2-206ENST00000474617 IGDCC4Q8TDY8 1250 aa25.46■■□□□ 1.67
CCM2-206ENST00000474617 NSUN4Q96CB9 384 aaKnown RBP25.46■■□□□ 1.67
CCM2-206ENST00000474617 SPATA32Q96LK8 384 aa25.46■■□□□ 1.67
CCM2-206ENST00000474617 CRAMP1Q96RY5 1269 aa25.46■■□□□ 1.67
CCM2-206ENST00000474617 ANKIB1Q9P2G1 1089 aa25.46■■□□□ 1.67
CCM2-206ENST00000474617 GOLGA6L4A6NEF3 574 aa25.45■■□□□ 1.66
CCM2-206ENST00000474617 TRIM37O94972 964 aa25.45■■□□□ 1.66
CCM2-206ENST00000474617 METAP2P50579 478 aaKnown RBP eCLIP25.45■■□□□ 1.66
CCM2-206ENST00000474617 GSTO1P78417 241 aa25.45■■□□□ 1.66
CCM2-206ENST00000474617 TXNRD1Q16881 649 aa25.45■■□□□ 1.66
CCM2-206ENST00000474617 TMEM67Q5HYA8 995 aa25.45■■□□□ 1.66
CCM2-206ENST00000474617 RBM27Q9P2N5 1060 aaKnown RBP25.45■■□□□ 1.66
CCM2-206ENST00000474617 NSFL1CQ9UNZ2 370 aaKnown RBP25.45■■□□□ 1.66
CCM2-206ENST00000474617 NEDD4P46934 1319 aa25.45■■□□□ 1.66
CCM2-206ENST00000474617 B4E1Z4 1266 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 ZBTB43O43298 467 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 PPARAQ07869 468 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 APOA5Q6Q788 366 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 CYB5R4Q7L1T6 521 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 FERMT3Q86UX7 667 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 ESR2Q92731 530 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 CRNKL1Q9BZJ0 848 aaKnown RBP25.44■■□□□ 1.66
CCM2-206ENST00000474617 ATP8A2Q9NTI2 1148 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 CCDC88AQ3V6T2 1871 aa25.44■■□□□ 1.66
CCM2-206ENST00000474617 CCDC196A0A1B0GTZ2 297 aa25.43■■□□□ 1.66
CCM2-206ENST00000474617 SYCE3A1L190 88 aa25.43■■□□□ 1.66
CCM2-206ENST00000474617 BRAPQ7Z569 592 aa25.43■■□□□ 1.66
CCM2-206ENST00000474617 NLGN1Q8N2Q7 840 aa25.43■■□□□ 1.66
CCM2-206ENST00000474617 LY9Q9HBG7 655 aa25.43■■□□□ 1.66
CCM2-206ENST00000474617 NCOA5Q9HCD5 579 aaKnown RBP25.43■■□□□ 1.66
CCM2-206ENST00000474617 STK36Q9NRP7 1315 aa25.43■■□□□ 1.66
CCM2-206ENST00000474617 CCDC69A6NI79 296 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 SLC3A2P08195 630 aaKnown RBP25.42■■□□□ 1.66
CCM2-206ENST00000474617 CCDC173Q0VFZ6 552 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 MIGA1Q8NAN2 632 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 LEO1Q8WVC0 666 aaPredicted RBP25.42■■□□□ 1.66
CCM2-206ENST00000474617 WASF1Q92558 559 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 C8orf76Q96K31 380 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 TSPY26PQ9H489 355 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 PODXL2Q9NZ53 605 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 ORC3Q9UBD5 711 aaPredicted RBP25.42■■□□□ 1.66
CCM2-206ENST00000474617 IQSEC3Q9UPP2 1182 aaPredicted RBP25.42■■□□□ 1.66
CCM2-206ENST00000474617 SLC12A7Q9Y666 1083 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 IFIT3O14879 490 aaKnown RBP25.42■■□□□ 1.66
CCM2-206ENST00000474617 FGRP09769 529 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 NFXL1Q6ZNB6 911 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 TTC6Q86TZ1 520 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 TDRD7Q8NHU6 1098 aaKnown RBP25.42■■□□□ 1.66
CCM2-206ENST00000474617 ZSWIM5Q9P217 1185 aa25.42■■□□□ 1.66
CCM2-206ENST00000474617 KDM4AO75164 1064 aa25.41■■□□□ 1.66
CCM2-206ENST00000474617 MECOMQ03112 1051 aa25.41■■□□□ 1.66
CCM2-206ENST00000474617 FBXO18Q8NFZ0 1043 aa25.41■■□□□ 1.66
CCM2-206ENST00000474617 DDX19AQ9NUU7 478 aaKnown RBP25.41■■□□□ 1.66
CCM2-206ENST00000474617 RGPD3A6NKT7 1758 aaPredicted RBP25.4■■□□□ 1.66
CCM2-206ENST00000474617 RGPD4Q7Z3J3 1758 aa25.4■■□□□ 1.66
CCM2-206ENST00000474617 PRKAB2O43741 272 aa25.4■■□□□ 1.66
CCM2-206ENST00000474617 FDPSP14324 419 aaKnown RBP25.4■■□□□ 1.66
CCM2-206ENST00000474617 ARPP21Q9UBL0 812 aaPredicted RBP25.4■■□□□ 1.66
CCM2-206ENST00000474617 MYH15Q9Y2K3 1946 aa25.4■■□□□ 1.66
CCM2-206ENST00000474617 POLRMTO00411 1230 aaKnown RBP25.39■■□□□ 1.66
CCM2-206ENST00000474617 LDHCP07864 332 aa25.39■■□□□ 1.66
CCM2-206ENST00000474617 CTDSPL2Q05D32 466 aa25.39■■□□□ 1.66
CCM2-206ENST00000474617 WTAPQ15007 396 aa25.39■■□□□ 1.66
CCM2-206ENST00000474617 SBK1Q52WX2 424 aa25.39■■□□□ 1.66
CCM2-206ENST00000474617 ADGRA1Q86SQ6 560 aa25.39■■□□□ 1.66
CCM2-206ENST00000474617 RCOR1Q9UKL0 485 aa25.39■■□□□ 1.66
CCM2-206ENST00000474617 DZIP1Q86YF9 867 aaKnown RBP25.38■■□□□ 1.65
CCM2-206ENST00000474617 UBAC1Q9BSL1 405 aa25.38■■□□□ 1.65
CCM2-206ENST00000474617 GPHNQ9NQX3 736 aaPredicted RBP25.38■■□□□ 1.65
CCM2-206ENST00000474617 TFCP2L1Q9NZI6 479 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms