RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PKP1Q13835 747 aa23.38■■□□□ 1.33
SSR1-204ENST00000474597 CNNM2Q9H8M5 875 aa23.38■■□□□ 1.33
SSR1-204ENST00000474597 WDR19Q8NEZ3 1342 aa23.37■■□□□ 1.33
SSR1-204ENST00000474597 MYH2Q9UKX2 1941 aa23.37■■□□□ 1.33
SSR1-204ENST00000474597 MFSD14BQ5SR56 506 aa23.37■■□□□ 1.33
SSR1-204ENST00000474597 ZNF219Q9P2Y4 722 aaPredicted RBP23.37■■□□□ 1.33
SSR1-204ENST00000474597 TIAM2Q8IVF5 1701 aa23.37■■□□□ 1.33
SSR1-204ENST00000474597 C10orf71Q711Q0 1435 aa23.37■■□□□ 1.33
SSR1-204ENST00000474597 BAZ2AQ9UIF9 1905 aaKnown RBP23.36■■□□□ 1.33
SSR1-204ENST00000474597 GJB2P29033 226 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 APOBRQ0VD83 1088 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 ST3GAL1Q11201 340 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 AKNAD1Q5T1N1 836 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 GIMAP6Q6P9H5 292 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 MFSD6Q6ZSS7 791 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 FBXL16Q8N461 479 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 FBXW7Q969H0 707 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 NAP1L2Q9ULW6 460 aaPredicted RBP23.36■■□□□ 1.33
SSR1-204ENST00000474597 BAG3O95817 575 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 KRT23Q9C075 422 aa23.36■■□□□ 1.33
SSR1-204ENST00000474597 RNF41Q9H4P4 317 aaPredicted RBP23.36■■□□□ 1.33
SSR1-204ENST00000474597 FAM205AQ6ZU69 1335 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 DDX11L8A8MPP1 907 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 MINDY4BA8MYZ0 360 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 GTF2IP78347 998 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 PPARAQ07869 468 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 SLF2Q8IX21 1173 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 GTF3C6Q969F1 213 aa23.35■■□□□ 1.33
SSR1-204ENST00000474597 B4E1Z4 1266 aa23.34■■□□□ 1.33
SSR1-204ENST00000474597 CHMP4CQ96CF2 233 aa23.34■■□□□ 1.33
SSR1-204ENST00000474597 TOMM22Q9NS69 142 aa23.34■■□□□ 1.33
SSR1-204ENST00000474597 ATP8A2Q9NTI2 1148 aa23.34■■□□□ 1.33
SSR1-204ENST00000474597 NEDD4P46934 1319 aa23.34■■□□□ 1.33
SSR1-204ENST00000474597 DLEC1Q9Y238 1755 aa23.34■■□□□ 1.33
SSR1-204ENST00000474597 WDR33Q9C0J8 1336 aaKnown RBP23.33■■□□□ 1.33
SSR1-204ENST00000474597 GRIK5Q16478 980 aa23.33■■□□□ 1.33
SSR1-204ENST00000474597 DOK7Q18PE1 504 aa23.33■■□□□ 1.33
SSR1-204ENST00000474597 ZNF274Q96GC6 653 aaPredicted RBP23.33■■□□□ 1.33
SSR1-204ENST00000474597 MROH7-TTC4A0A0A0MT08 1334 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 PFKFB2O60825 505 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 BRD1O95696 1058 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 ANTXR2P58335 489 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 DIXDC1Q155Q3 683 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 CC2D2BQ6DHV5 1058 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 CERS3Q8IU89 383 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 ZDHHC9Q9Y397 364 aa23.33■■□□□ 1.32
SSR1-204ENST00000474597 GOLGA6L22H0YM25 854 aa23.32■■□□□ 1.32
SSR1-204ENST00000474597 FOXD4L5Q5VV16 416 aaPredicted RBP23.32■■□□□ 1.32
SSR1-204ENST00000474597 FOXD4L4Q8WXT5 416 aaPredicted RBP23.32■■□□□ 1.32
SSR1-204ENST00000474597 TMEM87BQ96K49 555 aa23.32■■□□□ 1.32
SSR1-204ENST00000474597 ANAPC4Q9UJX5 808 aa23.32■■□□□ 1.32
SSR1-204ENST00000474597 RRP12Q5JTH9 1297 aaKnown RBP23.31■■□□□ 1.32
SSR1-204ENST00000474597 CLEC17AQ6ZS10 378 aa23.31■■□□□ 1.32
SSR1-204ENST00000474597 CYB5R4Q7L1T6 521 aa23.31■■□□□ 1.32
SSR1-204ENST00000474597 USP5P45974 858 aa23.31■■□□□ 1.32
SSR1-204ENST00000474597 SCRN1Q12765 414 aa23.31■■□□□ 1.32
SSR1-204ENST00000474597 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
SSR1-204ENST00000474597 DCP1AQ9NPI6 582 aaPredicted RBP23.31■■□□□ 1.32
SSR1-204ENST00000474597 SUGT1Q9Y2Z0 365 aa23.31■■□□□ 1.32
SSR1-204ENST00000474597 LAMB1P07942 1786 aa23.3■■□□□ 1.32
SSR1-204ENST00000474597 STX6O43752 255 aa23.3■■□□□ 1.32
SSR1-204ENST00000474597 KDM4AO75164 1064 aa23.3■■□□□ 1.32
SSR1-204ENST00000474597 ZBTB7AO95365 584 aa23.3■■□□□ 1.32
SSR1-204ENST00000474597 BAG4O95429 457 aaKnown RBP23.3■■□□□ 1.32
SSR1-204ENST00000474597 TTLL6Q8N841 843 aa23.3■■□□□ 1.32
SSR1-204ENST00000474597 INCENPQ9NQS7 918 aa23.3■■□□□ 1.32
SSR1-204ENST00000474597 ANGEL1Q9UNK9 670 aaKnown RBP23.3■■□□□ 1.32
SSR1-204ENST00000474597 PDIA4P13667 645 aaKnown RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 PTMSP20962 102 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 SYT1P21579 422 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 POLD1P28340 1107 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 PDIA3P30101 505 aaKnown RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 EVCP57679 992 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 PPP4CP60510 307 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 CTR9Q6PD62 1173 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 SUPT20HQ8NEM7 779 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 RTFDC1Q9BY42 306 aaPredicted RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 GPHNQ9NQX3 736 aaPredicted RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 ARPP21Q9UBL0 812 aaPredicted RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 USP17L12C9JPN9 530 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 USP17L21D6R901 530 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 PDCP20941 246 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 BTDP43251 543 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 CCT2P78371 535 aaKnown RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
SSR1-204ENST00000474597 LLPHQ9BRT6 129 aaKnown RBP23.29■■□□□ 1.32
SSR1-204ENST00000474597 SLC3A2P08195 630 aaKnown RBP23.28■■□□□ 1.32
SSR1-204ENST00000474597 PLCG2P16885 1265 aa23.28■■□□□ 1.32
SSR1-204ENST00000474597 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
SSR1-204ENST00000474597 SH3RF3Q8TEJ3 882 aaPredicted RBP23.28■■□□□ 1.32
SSR1-204ENST00000474597 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
SSR1-204ENST00000474597 ZSWIM5Q9P217 1185 aa23.28■■□□□ 1.32
SSR1-204ENST00000474597 KIF13BQ9NQT8 1826 aa23.28■■□□□ 1.32
SSR1-204ENST00000474597 GOLGA8BA8MQT2 603 aa23.27■■□□□ 1.32
SSR1-204ENST00000474597 SH2B2O14492 632 aaPredicted RBP23.27■■□□□ 1.32
SSR1-204ENST00000474597 C21orf2O43822 256 aa23.27■■□□□ 1.32
SSR1-204ENST00000474597 PCP11498 1178 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms