RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ARAP2Q8WZ64 1704 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 CCL15-CCL14A0A0B4J2E2 113 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 H0YGN5 161 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 GTF2A2P52657 109 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 IFIT5Q13325 482 aaKnown RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 FKBP5Q13451 457 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 CCL15Q16663 113 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 SLC4A8Q2Y0W8 1093 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 TWISTNBQ3B726 338 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 MFSD14BQ5SR56 506 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 FAM43AQ8N2R8 423 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 DNAAF4Q8WXU2 420 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 ZFP91Q96JP5 570 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 ARHGAP39Q9C0H5 1083 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 TMEM39BQ9GZU3 492 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 TDRD3Q9H7E2 651 aaKnown RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 PRKRIP1Q9H875 184 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 ZFYVE28Q9HCC9 887 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 ZNF70Q9UC06 446 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 SERPINA10Q9UK55 444 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 TAOK2Q9UL54 1235 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 CDH23Q9H251 3354 aa6.54□□□□□ -1.36
SNRNP40-204ENST00000474025 ZSWIM8A7E2V4 1837 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 SPDYE5A6NIY4 337 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 TLR2O60603 784 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 MYCP01106 439 aaPredicted RBP6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 MAP3K9P80192 1104 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 LACTBP83111 547 aaPredicted RBP6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 DZIP1LQ8IYY4 767 aaKnown RBP6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 TDRD7Q8NHU6 1098 aaKnown RBP6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 SH3TC2Q8TF17 1288 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 SHISA4Q96DD7 197 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 TTF2Q9UNY4 1162 aaKnown RBP6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 CHMP3Q9Y3E7 222 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 CSADQ9Y600 493 aa6.53□□□□□ -1.36
SNRNP40-204ENST00000474025 A0A1W2PPC1 479 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 TCP10L2B9ZVM9 353 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 BTBD19C9JJ37 291 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 PLIN1O60240 522 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 CRKP46108 304 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 GYG1P46976 350 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 GRIK5Q16478 980 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 CCDC27Q2M243 656 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 EPHA10Q5JZY3 1008 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 BEND3Q5T5X7 828 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 LMBR1LQ6UX01 489 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 LDHAL6AQ6ZMR3 332 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 WWC1Q8IX03 1113 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 FAM84BQ96KN1 310 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 ZCCHC17Q9NP64 241 aaKnown RBP6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 CNNM1Q9NRU3 951 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 SNCAIPQ9Y6H5 919 aa6.52□□□□□ -1.37
SNRNP40-204ENST00000474025 IL16Q14005 1332 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 FANCIQ9NVI1 1328 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 F6X3S4 739 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 GRM8O00222 908 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 IRF6O14896 467 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 WDHD1O75717 1129 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 GNRH1P01148 92 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 CETPP11597 493 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 CAPN2P17655 700 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 CTGFP29279 349 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 HIBADHP31937 336 aaKnown RBP6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 TNNI2P48788 182 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 PRMT2P55345 433 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 PPIL2Q13356 520 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 SNAPC2Q13487 334 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 KIF22Q14807 665 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 MTFR1Q15390 333 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 CCDC57Q2TAC2 916 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 TAF7LQ5H9L4 462 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 C17orf99Q6UX52 265 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 UBE2Q1Q7Z7E8 422 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 ERO1BQ86YB8 467 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 ZKSCAN4Q969J2 545 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 TRIM47Q96LD4 638 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 WRNIP1Q96S55 665 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 PRO3102Q9H379 93 aa6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 RBM27Q9P2N5 1060 aaKnown RBP6.51□□□□□ -1.37
SNRNP40-204ENST00000474025 ADGRA2Q96PE1 1338 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 CACNA1FO60840 1977 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 RPAP1Q9BWH6 1393 aaPredicted RBP6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 CACNB3P54284 484 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 HDLBPQ00341 1268 aaKnown RBP6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 FKBP1CQ5VVH2 108 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 GPR153Q6NV75 609 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 FBXO33Q7Z6M2 555 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 FAM83AQ86UY5 434 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 TEKT1Q969V4 418 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 PUS3Q9BZE2 481 aaKnown RBP6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 SRRDQ9UH36 339 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 RIPOR2Q9Y4F9 1068 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 NR2E3Q9Y5X4 410 aa6.5□□□□□ -1.37
SNRNP40-204ENST00000474025 VAMP4O75379 141 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 ECM2O94769 699 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms