RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PIK3R4Q99570 1358 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 ROBO2Q9HCK4 1378 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 ACEP12821 1306 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 HMOX1P09601 288 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 HDAC1Q13547 482 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 SSH1Q8WYL5 1049 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 TNFRSF25Q93038 417 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 NOP53Q9NZM5 478 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 NOB1Q9ULX3 412 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 AMOTL2Q9Y2J4 779 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 ARHGAP23Q9P227 1491 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 AKAP12Q02952 1782 aa7.36□□□□□ -1.23
ATPAF1-204ENST00000474020 USP6P35125 1406 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 ANKARQ7Z5J8 1434 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 ADARB2-AS1A8MUL3 147 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 TGFBR3LH3BV60 316 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 MSTNO14793 375 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 IGHDP01880 384 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 TRIM27P14373 513 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 ALAS2P22557 587 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 COL8A1P27658 744 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 C8orf34Q49A92 452 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 RTF1Q92541 710 aaKnown RBP7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 C3P01024 1663 aa7.35□□□□□ -1.23
ATPAF1-204ENST00000474020 NRKQ7Z2Y5 1582 aa7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 FER1L4A9Z1Z3 1794 aa7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 ITGB2P05107 769 aa7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 RLBP1P12271 317 aa7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 ELOAQ14241 798 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 RRS1Q15050 365 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 TWISTNBQ3B726 338 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 SLC26A8Q96RN1 970 aa7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 BCS1LQ9Y276 419 aa7.34□□□□□ -1.23
ATPAF1-204ENST00000474020 ARHGEF10O15013 1369 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 FLT4P35916 1363 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 PRR36Q9H6K5 1346 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 TOPAZ1Q8N9V7 1692 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 LTKP29376 864 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 AMPHP49418 695 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 RAB44Q7Z6P3 723 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 GCC1Q96CN9 775 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 CHMP4AQ9BY43 222 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 QTRT2Q9H974 415 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 EFCC1Q9HA90 598 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 DMGDHQ9UI17 866 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 OVOS2A0A0J9YW53 1432 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 OVOS2Q6IE36 1432 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 SBNO1A3KN83 1393 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 USP31Q70CQ4 1352 aa7.33□□□□□ -1.24
ATPAF1-204ENST00000474020 KRBA1A5PL33 1030 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 CEBPAP49715 358 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 EIF4A2Q14240 407 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 SULT6B1Q6IMI4 303 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 ANKLE2Q86XL3 938 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 TMEM57Q8N5G2 664 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 VTI1AQ96AJ9 217 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 MYO19Q96H55 970 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 ZMIZ1Q9ULJ6 1067 aa7.32□□□□□ -1.24
ATPAF1-204ENST00000474020 MAP2P11137 1827 aaKnown RBP7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 HTATSF1O43719 755 aaKnown RBP7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 VAMP4O75379 141 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 ZNF853P0CG23 659 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 ADH7P40394 386 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 DGKZQ13574 1117 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 SKAP1Q86WV1 359 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 BHMTQ93088 406 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 PHACTR3Q96KR7 559 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 SPOCK3Q9BQ16 436 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 ZBTB40Q9NUA8 1239 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 KLK14Q9P0G3 267 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 KIAA0232Q92628 1395 aa7.31□□□□□ -1.24
ATPAF1-204ENST00000474020 PTPRCP08575 1304 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 SOS1Q07889 1333 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 CEP170BQ9Y4F5 1589 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 PTPRUQ92729 1446 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 HMMRO75330 724 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 EPB42P16452 691 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 SMC5Q8IY18 1101 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 TRIM11Q96F44 468 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 STK31Q9BXU1 1019 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 RIMS1Q86UR5 1692 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 RTL1A6NKG5 1358 aa7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-204ENST00000474020 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 SPDYE3A6NKU9 549 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 ATG7O95352 703 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 PROCP04070 461 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 INPP5BP32019 993 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 IDH3AP50213 366 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 FKBP5Q13451 457 aaPredicted RBP7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 CCINQ13939 588 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 C11orf91Q3C1V1 193 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms